Pseudomonas salmasensis: HU731_000455
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Entry
HU731_000455 CDS
T07619
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psam
Pseudomonas salmasensis
Pathway
psam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU731_000455 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psam02044
]
HU731_000455 (tssC)
Secretion system [BR:
psam02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU731_000455 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QXH78323
LinkDB
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Position
110234..111712
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AA seq
492 aa
AA seq
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MTTIQHGKQPVQVIEGGSILDNIISQTLLGADDEAYGIAKRGVSAFIAELVKPHNRDEPV
KKRLVDRMIAEIDTKLSEQMDEILHHPDFQALEASWRGLQLLVDRTNFRENIKIELLNVS
RQDLLDDFEDSSEITQSGLYKHVYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASS
VAGMAHAPFIAAAGPSFFGLESFTGLPDLKDLRDHFEGPQFAKWQSFRQSEDARYIGLTV
PRFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIG
PQSGGAVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFS
ASSVQKPKSFGISEEGRAAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGAWKERTDLE
LELNKWVRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNVTVRPHFKYMGAD
FTLSLVGKLDKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgattcaacacggcaagcaacccgttcaggttatcgagggcggtagcatcctc
gataacatcatttcccagacgttactcggcgccgacgacgaggcttatggcatcgccaag
cgcggcgtgtcggcgtttatcgcagagctggtcaagccacataatcgtgatgagcccgta
aagaaacgcctggtcgaccggatgatcgccgagatcgataccaagctcagcgagcaaatg
gatgagattcttcaccacccggacttccaggcgttggaggcttcgtggcgaggcttgcag
ttgctggtcgatcgcaccaattttcgcgaaaacatcaagatcgaactgttgaatgtctcg
cgccaggacctgctggatgattttgaagactcctcggaaattacccaatccgggttgtac
aaacacgtctacagcgccgagtacggccagttcggcggccagccagtgggcgcaatcatt
gccaactactttctttcgcccagcgcacccgatgtgaaactgatgcaatacgcatccagc
gtcgccggcatggcccacgcgccctttatcgctgcggcggggccgagtttcttcggcttg
gaaagcttcaccgggttgcccgacctgaaggatctgcgggaccatttcgaaggcccgcaa
tttgccaagtggcagagcttccggcagagcgaagacgcccgatatattggcctcaccgta
ccgcgctttctgctgcgcacgccgtatgacccccttgagtgcccggtcaagaccttcgcc
taccaggagaatgtggttaacagccacgagcattacttgtggggcaataccgcctatgcc
tttgccactcgcctgaccgacagcttcgcgcgctttcgctggtgccccaacattattggc
ccgcaaagcggcggggcggtagaggaccttccgctgcatcacttccagagcatgggcgag
atcgaaaccaagattcctaccgaggtgctggtgtcggaccggcgcgagtacgagctggca
caagaaggtttcatcgccttgaccatgcgcaagggcagcgacaatgcggcgtttttttcc
gccagttccgtacagaagcccaaatcctttggcatcagtgaggagggcagggcggcagaa
ctcaattatcgcctgggcacccaattgccctacatgatggtggtcaaccgcctggctcat
tacctcaaggtgctgcaacgggagcagttgggcgcatggaaagagcggacggacctggag
ctggaactcaacaagtgggttcgccaatacgtggcggaccaagaaaaccccagcgccgaa
gtacgtgggcggcgcccattgcgtgccgcgcgcattgtcgtcagcgatgtcgaaggcgag
cctggctggtaccgggtcaacgtcacggtacgcccgcatttcaaatacatgggggcagac
ttcacattgtccctggtcggcaagctcgataaagaatga
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