Pseudomonas salmasensis: HU731_000960
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Entry
HU731_000960 CDS
T07619
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psam
Pseudomonas salmasensis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_000960
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU731_000960
Archaeal homologous recombinant proteins
HU731_000960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXH78419
LinkDB
All DBs
Position
complement(245667..246908)
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLKAQRPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQQPTLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
DRLLIPLPNAKGKIAAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRNKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPATLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGERLVGCEPILIPRSVNLQRLEAAPLADILKQL
GELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGTRGSA
EADDAQLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcatacctccgactggcacttgggccaaaacctccacggccaggaacgc
gacttcgaacacgcctgtttccttgaatggctgctgggccaactcaaggcacagcgcccg
gatgtgctgttgatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcccag
gagcgcttgtatgacttcatcatcagcgcccacgaacaacagccgacactgaccattgtg
atgatcgccggcaaccatgactccggctcgcgcatcgaactgcctgcacccctgatgcgg
cgtctgcgcacccatgccctgggccgggtgctgtggctggacgatggccaactggatgcc
gaccgcctgctgatcccgctgcccaatgccaaaggcaagatcgccgcctggtgcctggcg
ctgcccttcctgcggccggcggaagtcaccggtgcccagttgggcgatgattacctgcgc
ggtatcggccaagtgcatgaatggctgatcgcggccgccaatgccaagcgcaacaaaggc
caggcgttgatagccatcagccatgcgcacatggccggtgggtcggtatccgaagactcc
gaacgcagcttgatcatcggcaatgccgaggcgctgcctgccacactgttcgaccgaagc
gtggcgtatgttgccctcggccatctgcacaagccgcaaaaggtcaatggcgaggagcgc
attcgctacagcggctcgccaatccccttatcgttctccgaaatcggctacaagcaccag
attctcgacgtgacgttccagggcgaaaggctggtgggctgcgaaccgatcctgattccc
cgctccgtcaatctgcagcgcctggaagccgcgcccctggccgatatcctcaagcaactc
ggtgagttgcccgacatcgacctgctcgctgaaacccagcgccacccttggctggaagtg
cgcgtgcgcctcgacgagccgcaaccagacctgcgccaacagatcgaaaccgcgttgcaa
ggcaaggccgtgcgcctggtgcgtatcgccgccgaatacgccggcacgcgcggcagcgca
gaggcagacgatgcgcaactgatcgaactcgaccagctcacgccccaggagttgttcagc
cgcgcctggcaggacagctacggcagtgaagtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggagggcgaacagccatga
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