Pseudomonas salmasensis: HU731_002135
Help
Entry
HU731_002135 CDS
T07619
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psam
Pseudomonas salmasensis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psam03032
]
HU731_002135
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_002135
Enzymes [BR:
psam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU731_002135
DNA replication proteins [BR:
psam03032
]
Prokaryotic type
DNA Topoisomerases
HU731_002135
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU731_002135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXH78649
LinkDB
All DBs
Position
516312..517361
Genome browser
AA seq
349 aa
AA seq
DB search
MPDSPLPTDLPRDLHYVDDTQPGIRRKKVRGTFQYLNAKGERITDADEIKRLNALAVPPA
YTDVWICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQAFGAALPKLRKQLE
AQIAEPGFTREKVLATVVMLLDATLIRVGNTQYARENKSYGLTTLRNRHVDIKGSEIQFQ
FRGKSGVEHQVSVKDRRLARVVKRCMELPGQNLFQYLDEDGERHTISSQDVNDYLHSLTG
EDFTAKDYRTWAGTAMALAVLRELAWQPESDAKRHVVAMVKDVARQLGNTPAVCRKCYIH
PAVLEHFSLGQLSKLPKPRVRKGLKAEEVALAMFLEKLAEDLPRKVKVG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactctccgttacccaccgacctgccccgcgacctgcattatgtggatgacacc
cagcccggcatccgccgaaaaaaagtgcggggcacgttccagtatctgaacgccaagggc
gagcgcattaccgacgcggatgagatcaaacgcttgaatgcgctggcggtgccacccgcc
tacaccgatgtgtggatctgcgccgaccctcgcggccacctgcaagccaccggccgcgac
gcccgtggccgcaagcaataccgttaccacccacgctggcgcgaggtgcgcgacagcgac
aagtactcgcgcttgcaggcttttggcgccgcgttgcccaaattgcgcaaacagttggaa
gcgcaaatcgccgagccggggtttacccgcgaaaaggtgttggccacggtggtgatgttg
ctggacgccacgctgatccgcgtcggcaatacccaatatgcccgtgaaaacaaatcctat
gggctgaccaccttgcgcaaccgccatgtggacatcaagggcagcgagatccagttccag
tttcgtggcaagagtggcgtggagcatcaagtcagcgtcaaggatcgacgcctggcccgg
gtggtcaagcgctgcatggaattgccggggcaaaacctgttccagtacctggatgaagac
ggtgagcggcataccatcagctcccaggacgtcaacgactacctgcacagcctgaccggc
gaagattttaccgccaaggactaccgcacctgggccggcacggcgatggcgctggcggtg
ttgcgcgagttggcgtggcagcccgaatccgacgccaagcggcatgtggtggcaatggtc
aaggatgtcgcccggcagttgggcaatacgccggcggtgtgtcgcaagtgctatatccac
ccggcggtgcttgaacatttcagcctcggccaattgtcgaagctgcccaagccgcgagtg
cgcaaaggcctgaaagccgaagaagtcgcgctggcgatgttcctggaaaaactcgccgaa
gacttgccgcgaaaagttaaggtgggttag
DBGET
integrated database retrieval system
