Pseudomonas salmasensis: HU731_002635
Help
Entry
HU731_002635 CDS
T07619
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psam
Pseudomonas salmasensis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psam03009
]
HU731_002635
Ribosome biogenesis [BR:
psam03009
]
Prokaryotic type
ribosomal protein modification factors
HU731_002635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QXH78742
LinkDB
All DBs
Position
complement(643636..645834)
Genome browser
AA seq
732 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADICDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVDNLDADAQALLMPNSTSAAGTYIAGKDLPLEQTIANMSAILAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
LANAPFVHYPDERWFQPGPNDELPSEILDAYCLKVYNREGELRGSHLFDTNSGNEARGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPADVLAKYPGILAGIEGLEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGQAVTEPNNFVEHFIDSSGVVSWRF
FSAQSDYEFVEWDFSGQGEDSNAQEAATLFGILEGMGKESYMAVYEHLGATACRILVPDY
SEIYPVDDLIWDNTNKALFFREDILNLHRLNEEELQALVERLIESELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIFLALKQYEEAKECVEMFLQYNDNTVERGLFYQAMNAVLEME
LDDDLELADYEANFRRMFGDERMDAVIGSVDGSVRFYGLTPTSMKLEGLDRHLRLIDSYK
KLHAARANITQG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcaactttctcgacaaccttcggcttgaagccaagttcgatgacttc
acggtcattgccgaccagcccatccgctacaagggcgatggctcggcaccggggccattc
gactacttcctggcttcgtcggcgttgtgtgcggcgtattttgtgaagttgtactgccag
acgcgcaatattcccaccgagaatattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagattttcaagatccaggtcgaattgcccgcggacatctgcgacaag
gaccgccaaggcatcctgcgttccatcgaccgttgcaccgtaaaaaaggtggtgcaggcc
ggcccggagttcgtgattgaggaagtcgacaacctcgacgccgatgcccaggcgttattg
atgcccaactccacgtccgcagcgggcacctacattgccggcaaggacctgccgttggag
cagaccatcgccaacatgtcggcgattctcgccggcctgggcatgaagatcgagatcgcc
tcgtggcgcaatatcgtgcccaacgtgtggtcgctgcatattcgcgacgcccattcgccg
atgtgctttaccaacggcaagggcgcgacgaaagaaggcgcgctggcgtcggcgctgggc
gagttcattgagcgcctgaactgcaacttcttctacaacgaccagttctggggcgaggac
ctggccaacgcgccgttcgtgcattacccggatgaacgctggtttcagccgggccccaac
gatgagctgccgagtgaaatccttgatgcttactgcctgaaagtctacaaccgcgagggc
gagctgcgcggttcgcacctgttcgacaccaactccggcaacgaagcccgtggcattgtc
tcgctgccgttcgtgcgtcagtccgatggcgaggtggtgtatttcccctccaacctgatc
gaaaacctctacctgagcaacggcatgagcgccggcaacaccttggccgaagcccaggtg
cagtgcctgtcggagattttcgagcgggcggtgaaacgcgaaatcatcgaaggcgaattt
gccctgccggatgtacccgccgacgtgctggccaagtacccgggcatcttggcgggcatc
gaaggtttggaagctcagggctttccggtgctggtcaaggatgcgtccctgggcggtgaa
tttccggtgatgtgcgtgaccttgatgaacccgcgcaccggcggcgtgttcgcttcgttc
ggcgcgcaccccagcctggaagtggcgctggaacgcagcctcaccgagctgctgcaaggc
cgtagcttcgaaggcttgaacgacctgccgcagccgaccttcgaaggccaggcggtcacc
gaaccgaacaacttcgtcgagcactttatcgattccagcggcgtagtgtcgtggcgcttc
ttcagtgcccagtcggattatgaattcgtcgaatgggacttctccggccagggcgaagac
tccaacgcccaggaagccgccacgctgttcggcatcctcgaaggcatgggcaaagagtcg
tacatggcggtgtatgagcacctgggcgctaccgcctgccgcatcctggtgccggactac
tcggaaatctacccggtggatgacctgatctgggacaacaccaacaaggcgctgtttttt
cgcgaagacatcctcaacctgcaccgcctcaacgaggaagagttgcaggcgttggtcgag
cgcctgatagaaagcgagctagacgactacaccgatatcactacgttgattggcattgag
ttcgacgacaacaccgcgtggggccagttgaccatcctggagctgaagctgctgatattc
ctggcgctgaagcagtatgaagaggccaaggagtgcgtggagatgttcctgcagtacaac
gacaacaccgttgagcgcggcctgttttaccaggcgatgaacgcggtgctggagatggag
ttggatgacgacttggaactggctgactacgaggccaacttccggcgcatgttcggtgat
gagcgcatggacgcggtgatcggttcggtcgacggcagcgtgcgcttttatgggctgacg
ccgaccagcatgaagctggaaggcctggaccggcatttgcgcctcattgacagctacaag
aagctgcatgcggcgcgggccaacatcacccaaggctga
DBGET
integrated database retrieval system
