Pseudomonas salmasensis: HU731_007285
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Entry
HU731_007285 CDS
T07619
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psam
Pseudomonas salmasensis
Pathway
psam02020
Two-component system
psam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU731_007285
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HU731_007285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psam02022
]
HU731_007285
02035 Bacterial motility proteins [BR:
psam02035
]
HU731_007285
Two-component system [BR:
psam02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HU731_007285
Bacterial motility proteins [BR:
psam02035
]
Flagellar system
Flagellar assembly proteins
Others
HU731_007285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
AAA_2
MCM
AAA_3
HTH_30
MerR
HTH_20
FleQ
AAA_19
HTH_24
HTH_23
nSTAND3
HTH_11
HTH_28
Sigma70_r4_2
RsiG
AAA_22
TIP49
HTH_1
AAA_7
HTH_17
ATPase
DUF2249
NACHT
Myosin_head
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QXH80917
LinkDB
All DBs
Position
complement(1677359..1678735)
Genome browser
AA seq
458 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEEALEAVEQETFSLVVSDVNMPGMD
GHQLLGLLRVRQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVARHALG
VMPAAEGDGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSGRAKQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERPADIIPLAERLLNNHVKKMKHAQARLSPEAQACLVSYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAMGNGAAPLPSLAPAPVVAEAESGGALGDDLRRREFQMIIDTLRAER
GRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaggttttattggtggaagacgatcgcgccctgcgtgaagcattggcagac
acgctgctgttggcgggccatgactaccgtgcggtcggctctgccgaggaagccttggag
gcggtcgagcaggaaaccttcagcctggtggtcagcgacgtcaacatgcccggcatggac
ggccaccagttgctcggcctgctgcgcgtgcgccagccgcaactgccagtgctgctgatg
accgcccatggcgcggtggagcgggcggtggatgccatgcgtcaaggcgcggcggattac
ctggtcaagccgttcgagcccaaggcgttgatcgagctggtggcccggcatgccctgggc
gtgatgcccgcagccgagggcgatggcccgattgcctttgagccggccagcgcgcaattg
ctggagctggcggcgcgggtggcgcgcagtgattccaccgtgctgatttccggcgagtcc
ggcaccggtaaagaagtgctggcgcggtatattcaccagcaatcgggccgtgccaagcag
ccgttcattgcgatcaactgcgcggcgatccccgacaacatgctcgaagccaccttgttt
ggccatgaaaagggctcgttcaccggcgccatcgcggcccaggccggcaagttcgaacag
gccgacggcggcaccatcctgctcgacgaaatctcggaaatgcccctgggcctgcaagcc
aagttgctgcgcgtgttgcaggagcgtgaagtggagcgcgtgggcgcgcgcaagccgatc
cagctggatatccgtgtggttgccaccaccaaccgcgacctggcgggcgaagtggcggcg
gggcgcttccgtgaagacctgttctaccggctgtcggtgttcccgctggcctggcgccca
ctgcgcgagcgcccggcggatatcatccccttggccgagcgcctgctgaacaaccacgtc
aaaaaaatgaagcacgcccaggcgcgtttatcgcccgaggcccaggcgtgcctggtcagt
tatccatggccgggcaacgtgcgtgagctggacaatgcgatccagcgtgcgttgattttg
cagcagggcggtttgatccagccgcaagacttttgcctggccatgggcaatggcgctgcg
ccgctgccgagcctggccccggctcccgtggtcgccgaggcggaatcaggtggtgccttg
ggcgatgacctgcgccgtcgcgaattccagatgatcatcgacaccctgcgcgccgagcgc
ggccgccgcaaagaagcggccgagcgcctgggcatcagcccgcgcaccttgcgctacaag
ctggcgcagatgcgcgatgccggtatggacgtggaagcctatcttttcgccacctga
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