Pseudomonas salmasensis: HU731_007295
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Entry
HU731_007295 CDS
T07619
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psam
Pseudomonas salmasensis
Pathway
psam02020
Two-component system
psam02025
Biofilm formation - Pseudomonas aeruginosa
psam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU731_007295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU731_007295
09142 Cell motility
02040 Flagellar assembly
HU731_007295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psam03000
]
HU731_007295
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psam02035
]
HU731_007295
Transcription factors [BR:
psam03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU731_007295
Bacterial motility proteins [BR:
psam02035
]
Flagellar system
Flagellar assembly proteins
Others
HU731_007295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
Phage_TTP_14
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
QXH79595
LinkDB
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Position
complement(1680065..1681537)
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AA seq
490 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSNLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQMDSLRSDMEERVAINGHTPDF
GATAMLPPEGLDLKDYLGSLEQGLIQQALDDAHGIVARAAERLRIRRTTLVEKMRKYGMS
RKEGDEQADD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgtccgccgccgcgattta
gcggtgattttaaattttctcggtgaagaaaatttaccctgcggcagccacgattggcag
caggcggtcagctcgttgtcgtcgagccgtgaagtcatttgcgtattgatcgggacggta
aacgctcctggcgcagttctgggcctgttaaagacactgtctacctgggatgagttcctt
ccggtgttgctaatgggcgatatttcttccgtggacctgccggaagaccagcgccgccgc
gtgctgtccaacctggaaatgccgcccagctacagcaaattgctcgattccctgcaccgc
gcccaggtctatcgcgagatgtacgaccaggcccgcgagcgcggccgtcaccgtgagccc
aacctgtttcgcagcctcgtcggcaccagccgtgccatccagcacgtgcgccagatgatg
cagcaagtggccgacaccgacgccagcgtgctgatcctcggcgagtcgggcaccggcaag
gaagtggtcgcgcgcaacctgcactatcactccaagcgccgcgacgggcccttcgtgccg
gtcaactgcggggcgatcccggcagagctgctggaaagcgaattgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgctttgagctggccaatggcggc
accctgttcctcgatgaaatcggcgacatgccgttgccgatgcaggtcaagttgctgcgc
gtgttgcaggagcgcaccttcgagcgcgtgggcagcaacaagacccagagcgtggacgtg
cgcatcattgccgccacccacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcctcaacgtattccctatcgagatggccccgctgcgtgagcgc
gtggaagacatcccgttgctgatgaacgaactgatctcgcgcatggagcacgaaaagcgc
ggctccattcgcttcaactccgcggcaatcatgtccctgtgccgccacggctggccgggc
aacgtccgcgagctggccaacctggtggagcgcatggcgatcatgcacccatacggggtg
atcggcgtggtcgagttgccgaagaaattccgctacgtcgacgacgaagacgagcagatg
gacagcctgcgcagcgacatggaagagcgcgtggcgatcaacggtcataccccggacttc
ggcgccaccgcgatgttgccgcccgaaggcctggatctgaaggactacctcggcagcctg
gaacaagggttgatccagcaggccctggacgatgcccatggcatcgtggcccgcgccgcc
gagcgtctgcgtatccgtcgcaccaccctggtggagaagatgcgcaagtacggtatgagc
cgcaaagaaggtgatgaacaggcggatgattga
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