Pseudomonas salmasensis: HU731_007420
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Entry
HU731_007420 CDS
T07619
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU731_007420 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psam03019
]
HU731_007420 (recQ)
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_007420 (recQ)
Enzymes [BR:
psam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU731_007420 (recQ)
Messenger RNA biogenesis [BR:
psam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU731_007420 (recQ)
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU731_007420 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
GerE
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QXH79619
LinkDB
All DBs
Position
complement(1707771..1709900)
Genome browser
AA seq
709 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCIDGVQTWDATEPARQALSTIYRTG
QRYGVGHLVDVLLGKDNEKIRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE
GYGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSSTSQASQLVRGEEREQWEALRTLR
RKLAQEHSVPPYVIFPDSTLLEMLREQPTTMAEMARVSGVGARKLERYGQAFLEVLGGQA
EAPKEIADIRHELISLARAGMTPIQIAGQLQCSEKNVYTLLAEAIGKQQLSLEQALDLPE
DLLGEIQDAFLDGEGELPAVTEIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaggctcaacgcgtcctcaaggacatcttcggctacgacagttttcgtggc
cgccagggtgcgatcattgagcgcgtggccagtggcggcgatgccctggtactgatgcct
accggtggcggcaagtcgctgtgcttccaggtgccggcgctgttgcgcaatggcctggcc
gtggtggtgtcgccgctgattgcgctgatggacgatcaggtcgccacccttgaagaactc
ggagtcgctgccgcgtcgttgaactccaccctcagcgccgagcagcagcgcgacctggcc
gcccgcatcaagcgtggcgaggtgaaaatgctttacctggcgccggagcgcctggtgcag
ccacgcatgctggcctttttgcagagccttgagatcgccctgtttgccatcgacgaagcc
cactgtgtgtcgcaatggggtcacgatttccgccgcgaatacttgcagcttggccaattg
gcagaactgtttcccgatgtgccgcgcattgcgctgaccgccaccgccgacaagcggacc
cgcgaagagatcgtcgagcgcctgcatttgcagaacgccgagcgcttcctgtcgagtttt
gaccggcccaatattttctaccgcatcgtgcccaaggagcagccgcgcaagcagttgctg
gcgtttctgtccgaacggcgcagtgatgcgggcatcgtgtactgcctgtcgcgcaagaaa
gtcgacgaggtcgctgcgttcctctgtgagcaaggctacccggcgctgccttaccacgcc
ggcctgcccaatgaaacgcgatcagcgcaccaaaaacgcttcctgaacgaggaaggcctg
atcatggtggcgaccattgcctttggcatgggtatcgacaaatccaacgtgcgtttcgtg
gcgcacatggacctgcccaagtccctcgaggcctattaccaggaaaccgggcgtgctggc
cgtgatggcctgccggcggatgcctggatggtgtacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgtcacaagcgcctggagcagcacaag
ctcgacgccatgctctcgttgtgcgaagagacccgctgccgccgccagaccctgctggcg
tatttcgacgaagacatgcctgagccctgcggccactgcgataactgcatcgacggcgtg
caaacctgggacgccaccgaaccggcgcgccaggcgttgtcgacgatttatcgcaccggc
cagcgctatggcgtgggccatctggtggatgttctgctgggcaaggacaacgaaaaaatc
cgcagcttcggccacgagaaactctcggtgtacggtgtcggcaaggcccgcgctgaaggt
gagtggcgttcgctgtttcgccagatggttgcccgtggtctggtcgacatcgatatcgag
ggctacggcgggctgcgcctgaatgacagttgccggccgttgctcaagggcgaagtaagc
ctggaactgcgccgcgacctcaagccgcagaccaccgccaagagcagcagcaccagccag
gccagccaactggtgcggggcgaggagcgcgaacaatgggaagccttgcgcaccctgcgg
cgcaaactggcgcaggagcacagcgtgccaccctacgttatcttccccgactccaccttg
ctggagatgctccgcgagcagcccaccaccatggccgagatggcccgggtcagcggtgtg
ggcgcgcgcaaactggagcgctacggccaggccttcctggaagtgctcggcggccaggcc
gaagcgccgaaggaaatcgctgatattcgccacgaactgatcagcctggcccgtgccggc
atgaccccgatccagatcgccggccagctgcaatgctcggaaaaaaacgtgtacaccttg
ctcgccgaagccatcggcaagcagcaattgtccctggagcaggccctggatttgccagag
gatttgctcggtgaaatccaggacgcctttctcgatggggaaggcgaattgccagctgtg
acggagattgcgccgttgtttaccgggcgtgttccggaaggcgttttgtactgcgtgcgt
gccgctttgcagtcggaattcgaaatttag
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integrated database retrieval system
