Pseudomonas salmasensis: HU731_009295
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Entry
HU731_009295 CDS
T07619
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00061
Fatty acid biosynthesis
psam00071
Fatty acid degradation
psam01100
Metabolic pathways
psam01212
Fatty acid metabolism
psam02024
Quorum sensing
psam04146
Peroxisome
Module
psam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HU731_009295 (fadD1)
00071 Fatty acid degradation
HU731_009295 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HU731_009295 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU731_009295 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psam01004
]
HU731_009295 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psam04147
]
HU731_009295 (fadD1)
Enzymes [BR:
psam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HU731_009295 (fadD1)
Lipid biosynthesis proteins [BR:
psam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HU731_009295 (fadD1)
Exosome [BR:
psam04147
]
Exosomal proteins
Exosomal proteins of breast milk
HU731_009295 (fadD1)
Exosomal proteins of breast cancer cells
HU731_009295 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
QXH79967
LinkDB
All DBs
Position
complement(2105973..2107664)
Genome browser
AA seq
563 aa
AA seq
DB search
MNEDFWKDKYPAGIAAQINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLSPFKRVLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGHGQPVNDASPASGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGPQVMKGYWQ
RQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacttttggaaggataagtaccccgccgggattgctgcacagatcaatcca
gacgagtatccgaatattcaggcggtactgaagcagtcctgccagcgcttcgctaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgaactgtacgaattgtccggc
gcattcgccgcgtatctgcaacagcataccgacttgaagcctggcgatcgaatcgccgtg
caactgcccaacgtcctgcaatacccggtcgccgtattcggtgctatccgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccaattcaatgat
tcgggggccaaggccctggtttgcctggccaacatggcgcacctggctgaaaaagtcgtg
cccaagaccgccgtcaaacatgtgatcgtcaccgaagtcgccgacctgctctcgccgttc
aagcgcgtgctgatcaacagcgtgatcaagtacgtgaagaaaatggtcccggcctatcat
ctgccccaggccatcaagttcaacgatgtactcgccaagggccatggccagccggtcaac
gatgccagcccggccagcggcgatgtggccgtgttgcaatacaccggcggtactaccggc
gtggccaagggcgcgatgctgacccaccgcaacctcgtggccaacatgctgcaatgcaag
gcgctgatgggctccaacctcaacgaaggctgcgagatcctgatcacgccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctcaacaccctgttcgtggcgctgtgcaacaacgaaggtttc
cgcaagctggacttctctgcgctgaaagtcaccctgtcgggcggcatggcgttgcaactg
gcggcggcggagcgttggaaggccgtgaccggctgcgcgatctgcgaaggctacggcatg
accgaaaccagcccggtggccacggtcaacccgatccagcacatccagatcggcaccatt
ggcattccggtgccttccaccgtgtgtaaagtcatcgccgacgacggcaccgagcttgca
ctgggtgaaaccggcgagctatgtgtgaaaggtccgcaagtgatgaagggctactggcag
cgccaggacgccaccgacgagatgctcgacagcgagggctggctgaaaaccggcgacatc
gcgatcatccagccagacggctacatgcgtatcgtcgaccgcaagaaggacatgattctg
gtctccggtttcaacgtctaccccaacgagctggaagacgtgctggcgggcctgccgggc
gtgctgcagtgtgcggccatcggcgtaccggatgaaaaatccggcgagcacatcaagctg
ttcatcgtggtcaagccaggggctacgctcaccaaggaccaggtgatggaacacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtggagttccgtgatgcgttgccgacc
accaacgtgggcaagatcttgcggcgtgaattgcgggatgaagagctgaagaaactcggt
cttaaaaagtaa
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