Pseudomonas salmasensis: HU731_013260
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Entry
HU731_013260 CDS
T07619
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam03030
DNA replication
psam03430
Mismatch repair
psam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU731_013260
03430 Mismatch repair
HU731_013260
03440 Homologous recombination
HU731_013260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psam03032
]
HU731_013260
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_013260
Enzymes [BR:
psam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU731_013260
DNA replication proteins [BR:
psam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU731_013260
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU731_013260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QXH80706
LinkDB
All DBs
Position
2968933..2969640
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFGWLRTKKPGLSTAQQQRLEQLPKPAELGDGPLRSQRWVVVDLETSGLNLHRDQVLS
IGAVVIEDGAVDFSQLFERTLQRTDTKLSPSVLIHGLGPSAIAAGSDPAEALLDFMAFVG
DSPLLAFHAPFDQHMLCRALKDSLGHRLSHPFLDVADLAPLLCPEAHIREAGLDDWLNHF
KLQAGERHHASADALATAELMLILFSRARQQQIDTPQALQARLAQWKRRKQSPSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgtttggctggctgcgcaccaaaaagcctgggctcagcactgcgcaacagcag
cgcctggagcagttacccaagcccgccgaactgggcgatggcccattgcgcagccagcgc
tgggtggtggtcgacctggaaaccagcggcctgaacctgcaccgcgaccaggtgctgtcc
atcggcgccgtggtcatcgaggacggtgcggtggatttttcccaactgttcgagcgcacc
ctgcagcgcaccgacaccaagctcagccccagtgtgctgatccacgggctggggcccagt
gcaatcgctgccggcagcgacccggccgaggcgttgctggatttcatggcgttcgtgggc
gacagccctctgctggcttttcatgcgccgtttgatcaacacatgctgtgccgggcgctc
aaggacagcctggggcatcgtctgtcccatccattcctggatgtagcagacctggcccca
ctgttgtgccccgaggcgcatatccgcgaggccgggctggatgactggctcaaccacttc
aagctacaggccggcgaacgccaccatgccagcgccgatgcactggcgacggcggagctg
atgctgatcctgttcagccgtgcgcggcagcaacagatcgacacgcctcaggcgctgcaa
gcgcgtttggcccaatggaaacgacgcaaacagtccccttccctttaa
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