Pseudomonas salmasensis: HU731_015025
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Entry
HU731_015025 CDS
T07619
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00300
Lysine biosynthesis
psam00470
D-Amino acid metabolism
psam01100
Metabolic pathways
psam01110
Biosynthesis of secondary metabolites
psam01120
Microbial metabolism in diverse environments
psam01230
Biosynthesis of amino acids
Module
psam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU731_015025 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU731_015025 (lysA)
Enzymes [BR:
psam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HU731_015025 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXH75773
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All DBs
Position
3328658..3329905
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AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKSREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGDCGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVTPRASDARAYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggccttgtccgcg
attgcccagcgcttcggcaccccgacctatgtgtactcgcgtgcgcatatcgaagcccaa
taccgctcgttcaccgacgcgctcgacggcgtgccccacctggtgtgctacgcagtcaag
gccaactccaacctgggtgtactcaatgtcctggcgcgtcttggcgctggttttgacatc
gtgtcccgtggcgagctggaacgcgtactggccgccggcggccaggcggacaaaatcgtc
ttctccggtgtcggcaagagccgcgaagacatgcgccgcgccctggaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtcgcagccgagatg
ggcgtgcgtgcgccgatctccctgcgcgtcaacccggacgtcgacgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcattgccatcgccgacgccgaagac
gtgtacatccgcgccgcccaactgccgaacctggaagtgctgggtgtcgactgtcatatc
ggctcgcaactgaccacattgccaccgttcctggatgccctcgaccgcctgctggcgttg
atcgaccgcctgggcgactgcggcatctacctgcaccacatcgacctcggtggtggcgtg
ggtgtgcgttatcgcgatgaagagccgccgctgattgccgactatatccaggccgtgcgc
gagcgcatcgaaggccgcgacctgacgctgatgttcgagccaggccgctacatcgtcgcc
aacgctggcgtgctgctgactcaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtcaccgccgtgacgccgcgtgcaagcgacgcccgcgcctatgacatcgtcgggccc
atctgcgagaccggcgacttcctggccaaggatcgtgagttggcgcttgaggaaggtgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcatttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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