Pseudomonas salmasensis: HU731_015365
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Entry
HU731_015365 CDS
T07619
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
psam
Pseudomonas salmasensis
Pathway
psam02025
Biofilm formation - Pseudomonas aeruginosa
psam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU731_015365 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU731_015365 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psam02044
]
HU731_015365 (tssM)
Secretion system [BR:
psam02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU731_015365 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QXH75839
LinkDB
All DBs
Position
complement(3401582..3405082)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIVLVFALWVAYRVFRI
IQARRQAAEVMRSLAAETPVDPNSVATAEELSTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWVARGVLAATAALVVVVSSLWWVSYRANQAYIAQVDQKVVP
LGQTVQNLSPAQREVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRLNEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVARETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGEAQPTANAPAPADDPV
TAHFAELNSIVSKNEGEPAAIDGLLSDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQRLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgattgcc
ctgagcctgatcatctggtttgttggcccgctgctggacgtgctggtgcccgaagggcgc
cgttgggcgctgatcgtgctggtgtttgcgctgtgggtggcctaccgcgtgttccgcatt
atccaggcccgtcgccaggccgccgaagtgatgcgcagcctggccgcagaaaccccggtc
gaccccaacagcgttgcgaccgccgaagagctgtccacgctgcgccagcgcatggacgaa
gccctggcactgctgaaaaaggccaagctgggcggcgatgagcgccgcaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggctcgggcaagaccaccgcgctggtcaat
tccgggctgcatttcccgctggcggcgcaattgggcgctggtgcggtgcggggcgtgggg
ggcacgcgcaattgcgactggtggtttaccgaccaggccgtattgctcgacaccgctggc
cgctataccacccaagacagtaactccacggtggataaagccgcctggctgggttttctc
gacctgctgaaaaagcagcgttcgcgccggcctatcgacggtgcgtttatcgccatcagc
ctctcggatctgctgctgggcaccgacgccgagcgcgcagcccatgccgccgcgattcgc
ctgcgcatccaggagctgtatacgcagctgggcgtgcgtttccctatctacctgatgctc
accaagctcgacctggtgccgggcttcatggagttcttcgacaacctgagcaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaaaaacagcgacagcccg
ctggcgcacctgcaaagcgaattcgccggcctggagcagcgcctcaacgaacgcctggtc
gagcgcttgcaacaggagcgcgacccggcacgacgcgacctgatctacggcttcccgcag
cagttcggcgcgttgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaat
gcctttgaagagcgcgtgttgctgcgtggcgtgtacttcaccagcggcacccaggaaggc
agcccgattgaccgcctgatcggtgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagcggcaccgggcgcagttacttcatcgagaaactcttcaccgccgtg
gcctttgccgagcgcggcctggtgggggtgaacccgaaagtcgagcggcgccgcaagtgg
gtcgcccgtggcgtactggcggccaccgccgccttggtggtggtggtcagcagcctgtgg
tgggtgagctatcgcgccaaccaggcgtatatcgcccaggtcgatcagaaggtcgtgccc
ctgggccagaccgtccagaacctgagccctgcacaacgggaagtgctcgccgtgctgccg
ttgcttaacgcggtgaagaacctggcaggggattcgccgagctggtccgaagggctgggg
ctgtaccagggcgatatgctcgaagccgagtccgccagcgtgtaccgcaaactcttgatc
gccgtgttcgcgccacgcctggtgacgcgtatcgaagagcaactgcacggcggcggcaac
tcagactttctctatgagggcctcaaggcttacctgatgctcgccgacaccgagcattac
gacccggacttcatcaaggcctggatcgccctggactgggaccgcaacttgccccgtgac
ctgccggccgaccagcgccaggccctggccgggcacttgcaggcgctgttcgaacgccac
ccgccgagcgcacgcctggacccacggctgatcgacgacctgcgtcgccaattgcagcaa
ttgccggtagcccagcgcgtgtacgaccgcgtcaagcgccagaaactgcccgaaggtatc
ccggactttcgtctcaatgaggccgccggtcgcgatgccgcactggtgttcagccgcaag
agcggcaagccgttaggcgagccgttgagtggtttctttactgccaagggctatcgccag
gcgtttttgctcagcagcctgaaccagaccggcaccctggccgaagagcaatgggtgctg
ggccatgaacaggccgaccagcagaacgtggtgagcctggccgccgacgtgcgccgcttg
tacttccaggattaccagcgccagtgggacgcgttgctcgccgacatcgactttgtgccg
atcaccagcgtggcacaggccgccgatgtgctgcgggtgatttccggtcccacctcgccg
ctgaaaaaactgttggtggcggtcgccagggaaaccgacctgcaagccgaagaacgccaa
ctggccgccaaaggcgtgccggtggaaggcggcgtggacaagctcaaggagcgcctcggc
agcttgctgggcgaggcgcaaccgacggcgaatgccccggcgccggcggatgatccggtg
accgcacactttgccgaactcaacagcatcgtcagcaaaaacgaaggcgaaccggcggcc
atcgacggcctgctgtcggacatgaatgcgctgtatgtgcaggtcagcgccatggtcggt
gccagcggcgatgccttgctcggcgaggccaagaaccaggcggcggctgcggccacgcgg
gtcagcctgaacgccgagcgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgtaaccaactgaacgcagcctgggtc
agtgaagtggtcaatgtgtatcgccagtcattggccgggcgttacccgatgtcgccgggc
agtgcgcgggacgccaccctggatgacttcggccagttcttcggtgtgggcggggtgatg
gacaactacttccgcaaatacctgcaaccctatgtggacacgtcggcgcagacctggcgc
tggcaaccgggggcggcgcagaggctggggattgcccctggcgtgctgcaaaccttccag
cgtgcggcgacgattcgggacgcgttcttccgctccggtggcacccagcccatcgtgcgt
tttgagctcaagccggtgtcgatggatcccactatcacccagttcctgctggacctggac
ggccagcaactgagctacgaccacggcccgagccgcccggtagcgatgcagtggccgaac
cccggcagcattggcgtggtgcgtatttccatcatgccgccgtcggccagtggtcgctcc
ggcatcaccctggacggcccttgggcctggttccgcctgctggagcaatcggacctcacc
gcaggcaattcgccggaccgtttcaacctgcgcctgcgggtcgatggcgcgagcatcgcc
tacgagttgcgcgccaacagtgcgttcaacccgttcaagagccgcgtgctcagcggcttc
agcctgccggagcggctatga
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