Pseudomonas salmasensis: HU731_015800
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Entry
HU731_015800 CDS
T07619
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam03420
Nucleotide excision repair
psam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU731_015800 (uvrD)
03430 Mismatch repair
HU731_015800 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_015800 (uvrD)
Enzymes [BR:
psam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU731_015800 (uvrD)
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU731_015800 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HU731_015800 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXH75921
LinkDB
All DBs
Position
3511060..3513243
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEDDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETPFSLGQQVKHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaatgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccatcgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgggcgcattggcaggaagcggggctgagccagaccttccagattctcgacagcgacgac
cagcaacgcctggtcaagcgcgtgatccgcgagctgggcctggacgaacaacgctggccg
gcgcgccaggcgcagtggtttatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagcggcgacctgttcctggccaccatgcgcagcatttatgaagcctatgaa
gcggcctgcgtgcgtgctggcgtcatcgacttctccgaactgctgctgcgtgccctcgac
ctgtggcgcgacaaccccggtttgctggcccattaccaaaaacgcttccgccacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcggctgctggccaag
ggcggcgacagcctgatggtggtgggcgatgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgcggtgaccatccgc
ctggagcagaattaccgctccaccgccgggatcctcaaggcggccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aacctgtacgcggcgttcaatgagcacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgcactgaaaaccggcctggcccgcagcgatatcgcgattctgtaccgctccaacgcc
caatcgcgggtgctggaagaagccttgctgcgcgagcgcatcccgtaccgcatctacggc
ggccagcgcttcttcgaacgtgccgaaatcaagaacgccatggcctacctgcgcttgctg
gaaggccgggggaacgatgcggcgctggagcgggtgatcaatatcccggcccgcggcatt
ggcgagaaaaccgtcgaagcgatccgcgaccatgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaacaaaggcctgactggccgtgctgccggggcgttg
ggggtgtttgtcgagctgatcgagaacctggccgccaagtgcgcagaaatgccgctgcac
ctgatgacccagactgtcatcgagcagtccgggctgatcgcctatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgctcgcgcg
ttcgaaaacaccgaggacgacgaagagctgacgccgctcgccgccttcctgggccacgcc
tcgctggaagccggcgatacccaggccgacgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcttggaagaacccggccgtcttgaagaagaacgccgcctg
gcctacgtgggtattacccgggcgatgcagaacctggtgatgacctacgccgagacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgcttcgtacgtgaggtgcctaag
gggctgatccaggaagtgcgcttgtccaacagcgtcagccgcccgttcggcggtggccag
caacagaactccagcagcatgtttgccggctccgaaataccggaaaccccgttcagcctg
ggccagcaggtcaagcatgcgatcttcggcgagggcgtgatcctcaacttcgaaggcgcc
ggcgcccaggcccgggtgcaggtgaacttcgccgagggcagcaagtggctgatgatgggt
tacgccaagctcgaagcggtctga
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