Pseudomonas salmasensis: HU731_016465
Help
Entry
HU731_016465 CDS
T07619
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam03030
DNA replication
psam03410
Base excision repair
psam03420
Nucleotide excision repair
psam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU731_016465 (polA)
03410 Base excision repair
HU731_016465 (polA)
03420 Nucleotide excision repair
HU731_016465 (polA)
03440 Homologous recombination
HU731_016465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psam03032
]
HU731_016465 (polA)
03400 DNA repair and recombination proteins [BR:
psam03400
]
HU731_016465 (polA)
Enzymes [BR:
psam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU731_016465 (polA)
DNA replication proteins [BR:
psam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HU731_016465 (polA)
DNA repair and recombination proteins [BR:
psam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HU731_016465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU731_016465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QXH76047
LinkDB
All DBs
Position
3646217..3649012
Genome browser
AA seq
931 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAASRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDIEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKIDVPLDIGLDDLHLIEPDREKLLELYTLLEFKSWYDEIQRDTKRVELKA
ANEVAPVAQVPVEAVVSVPVETVYTTILDQATFDLWLQKLNDAKLFAFDTETTGIDAQQA
QLVGLSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMN
ILANCAIGGDPAQGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDHDTVSFQDIAG
KGAKQLTFDQIALEQAGPYAAEDADVTLRLHQHLYAQLAAIPSLASVLTDIEIPLVPVLA
RIERQGALVDKDLLGIQSIELGNKMVELERQAYEIAGEEFNLGSPKQLGAILYEKLGMPV
LKKTGKGQASTAEEVLAKLAEDDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHL
SKDEGLMNAFRNDLDVHTATAAEVFKVELNEVTSNQRRSAKAINFGLIYGMGAQKLGKDI
GVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERA
AAERTAINAPMQGTAADIIKKAMVQVDNWLTESGLDAKVILQVHDELVLEVREDLVAQVS
EKIREHMSAAAQLDVPLVVDVGVGDNWDEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcttcttatctgtaccgcgccttccac
gcgctgccaccgctgaccacctccaaaggcctgcccaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccggacagcccgttcgcggtggttttcgac
gccaagggcgggacgtttcgcgatgagatgtacgccgaatacaaagccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagccgctgcatcaaagcgtgatcgctcttggc
ttcccgttgctgtgcgtcgagggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccagccgcccggtggtgatctccaccggtgacaaagacatggcgcag
ttggtggacggccacattaccttggtcaacaccatgaccggtagctccatggacatcgag
ggcgttaaggagaaattcggcgtcgctccggagcagatcatcgactatctggcgttgatg
ggggattcgtccgacaacattcccggcgttccgggcattggccccaagaccgcctccggc
ttgctggtgggggtcaatggcggcctcaaagagctttatgagcagttggatattgtgccg
accctgcctatccgtggggccaagaccctgccggccaagctggaagagcacaaggagatg
gcattcctgtcctatcagttggcgacgatcaagattgatgtgccgctggatatcgggctg
gatgatttgcacctgatcgaaccggaccgcgaaaagctgcttgagctgtacacattgctg
gagttcaagagctggtacgacgagatccagcgcgacaccaagcgtgtcgagctgaaggcg
gccaatgaagtcgcgcctgtcgcgcaggtacccgtggaggcggtggtatcggtgcccgta
gagacggtttacaccaccatcctcgaccaggccacgttcgatctgtggctgcagaagctc
aacgacgccaagctgtttgccttcgataccgaaaccaccgggatcgatgcccagcaggcg
caattggtcgggctttcgttcgccgtgcagccccatgaggctgcctacattccgctgacg
cacgcctacatcggtgcgccggagcagttggaccgcgacaccgtgctgctggccctgaag
ccattgttggaagacccgaccaaactcaaggtgggccagcacgccaagttcgacatgaac
atcctggccaactgcgccattggcggcgaccctgcccagggcattaccgtgcgcggcatc
gccttcgacaccatgctcgaatcctatgtgctcaactccaccgcgacgcggcacgatatg
gacagcctggcgaagaaatacctggaccacgacacggtcagcttccaggacatcgccggc
aaaggcgccaagcaactcacgttcgaccagatcgcccttgagcaagccggcccttacgcg
gccgaagatgccgacgtgaccttgcgcctgcatcagcacttgtacgcgcaactggcagcg
atcccgagcctggccagtgtgctgacggacatcgagatcccgctggtgccggtactggca
cgcatcgagcgccagggcgcactggtggacaaggacctgctcggcattcagagcatcgag
ctgggtaacaagatggtcgaactggagcgccaggcgtacgagatcgccggtgaagaattc
aacctggggtcgcccaagcaactcggggcgatcctgtacgagaaactcggcatgccggtg
ttgaaaaaaaccggcaagggccaggcctccacggctgaagaagtgctggccaaactggcc
gaagatgatttcccgctgcccaaggtactgatgcagtaccgcagcatgagcaagctcaaa
agtacctataccgaccgcctgccggaacagatcaacccgcgtaccgggcgtattcatacg
tcctaccatcaggccgtcgcggcgaccgggcgcttgtcctccagcgacccgaacctgcag
aacatcccggtgcgcaccgccgaggggcggcgcattcgccaggcatttgtcgcgcccaag
ggctacaagctgctggcggcggactattcgcagatcgagctgcggatcatggcgcatttg
tccaaggacgaagggttgatgaatgcctttcgcaatgatctggacgtgcacacggccacg
gcggccgaagtgttcaaggtcgagttgaacgaggtcacgtccaaccagcgccgcagcgcc
aaggcgatcaacttcggcctgatctacggcatgggtgcccagaagctgggcaaggacatc
ggtgtcgataccaagaccgccaaggcttacatcgatgtgtacttcgcccgctatccaggg
gttcgcgaatacatggagcgcacccgcgcccaggcggcggatcagggctatgtcgaaacc
ttcttcgggcgacgcctgtacttgccggatatcaactccaacaagccccaggagcgcgcg
gcggccgagcgcacagcgatcaacgcgccgatgcagggcacggcggcggacatcatcaag
aaagccatggtgcaggtggataactggctgaccgagtcgggcctggacgccaaggtcatc
cttcaggtgcacgacgaattggtgctggaggtgcgcgaagacctggtcgcgcaggtcagc
gagaagattcgcgagcatatgagcgcggcggcacagttggacgtgcctttggtggtggac
gtaggcgtaggcgacaactgggacgaggcgcactga
DBGET
integrated database retrieval system
