KEGG   Pseudomonas salmasensis: HU731_017515
Entry
HU731_017515      CDS       T07619                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psam  Pseudomonas salmasensis
Pathway
psam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU731_017515
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psam02022]
    HU731_017515
Two-component system [BR:psam02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HU731_017515
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 FleQ HTH_8 AAA AAA_16 DUF6716
Other DBs
NCBI-ProteinID: QXH76234
LinkDB
Position
complement(3900468..3901853)
AA seq 461 aa
MSIDNSIQVVLIDDDPHLRQALCQTLDLAGLKVLPLGEANGLTARLSRDWPGVVVSDIRM
PGMDGLELLAELHGQDADLPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALALRRLVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATKADVLILGETGA
GKEVVARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHS
WPGNVRELQNAAERFALGLELALDSSQDHPATGVLTSTPGGLSEQVEQFEKSLIAAELTR
PHSSVRSLAEALGVPRKTLHDKLRKHGLNFADSASQSADDE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagtatcgacaactcgattcaggtggtcttgatcgacgacgatccacacctgcgtcag
gccctgtgccagaccctggacctggccggcctgaaagtcctgcccctgggcgaagccaac
gggctcaccgcacgcctgtcccgcgactggccgggcgtggtggtcagcgacatccgcatg
cccggtatggacggcctggaactgctggctgaattgcacggccaggacgccgacctgccg
gtgctgctgatcaccggccacggcgacgtaccgctggcggtgcaggccatgcgtgccggc
gcctatgactttctggaaaagccctttgccagtgacgcgctgctcgacagcgtgcgtcgt
gccctggccttgcgccggctggtgctggacaaccgcagcctgcgcctggccctcagcgac
cgccagcaactgagcacgcgcctggtagggcactcgccacagatgttgcgcctgcgcgaa
caaatcggtgcgctggccgcgaccaaggccgatgtgctgatcctcggcgaaaccggggcg
ggcaaagaggtcgtcgcccgcgccctgcacgacctttcaagccgacgcagcggcccgttt
gtcgcgatcaacgccggggccctggcggaatcggtggtggaaagcgaactgttcggccat
gaacccggcgcgtttaccggcgcgcaaaagcgtcgcatcggcaagttcgagtttgccaat
ggcggcacgctgttcctggatgaaattgaaagcatgagcctggatgtacaggtcaagttg
ctgcgccttttacaggagcgcgtagtggaacgcctgggtggcaatcagctgatcccgctg
gatatccgcattatcgccgccaccaaggaagacctgcgccaggccgccgaccagggccgc
ttccgtgccgacttgtattaccgcctcaatgtggcgccgctgcgcatccccccgctacga
gaacggggtgaagatgcgctgatgctgttccagcacttcgccgacgaggccagcagccgc
cacggcctgcccttgcacgaactgcaaccgggccagcgcgcgctgttgctgcgccacagc
tggccgggcaatgtgcgggaactgcaaaacgccgcggagcgtttcgcccttggcctggag
ttggcattggatagcagccaggaccatcccgccaccggcgtgctgacctccacccccgga
ggcctgagcgagcaagtcgaacagttcgaaaaaagcctgatcgccgccgaactgacccgc
ccccacagctccgtgcgcagcctcgccgaagccctgggcgtgccgcgcaaaaccttgcac
gacaaactgcgcaaacacggtctgaacttcgccgacagtgccagccagagcgccgacgac
gaatga

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