Pseudomonas salmasensis: HU731_021220
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Entry
HU731_021220 CDS
T07619
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00550
Peptidoglycan biosynthesis
psam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU731_021220 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psam01002
]
HU731_021220 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psam01011
]
HU731_021220 (dacB)
Enzymes [BR:
psam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HU731_021220 (dacB)
Peptidases and inhibitors [BR:
psam01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HU731_021220 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psam01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HU731_021220 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QXH76931
LinkDB
All DBs
Position
4732986..4734443
Genome browser
AA seq
485 aa
AA seq
DB search
MHFGKWFHTSTLLVGLSFLLGGCASVSQNSTPATLDKLLSDPALQGATVSLMVRDASTGT
TLYQHNPRTRLVPASNLKLLTTAAAMDVLGPHYRFATQLLSNGMRQGDRLTGNLYLRGLG
DPSIQFADYQALAAQLASQGVRQVQGDLVFDDTWFDAERLGVDWSHDDETTYYGAQISAL
TVAPNTDFDAGSVLVTAKAPLRVGSPVGVEIYPPTDYLQLNNRAVSGPGNSYGINRRHGT
NLLQLSGAMAPGRQSQQLVSVWEPTQLVANLFEQALAQQGIKVLGRRVMGGASPAGVTVL
AEHQSAPLQELIVPLLKLSNNAMSEALLKAMGRQTANSGTASAGAVAVAGFLKRQGLDTS
AVSQVDGSGLSRRNLVSSQTLTDLLLAASKQPWFEAWYNALPVAGNADRMTGGSLGYRLR
GTAAENNLHAKTGSMAGVSSLSGYLTDAHGRKLVFAMLTNNYVVAGAQVKAVENRVAVAL
SRSED
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcactttggaaaatggttccacaccagcaccctgctggtcggcttgagttttttactg
ggcggctgcgccagcgtctcccagaactccactccggcaaccctggataagctgttgagt
gacccggcgctgcaaggcgccaccgtctcgctgatggtgcgtgacgccagcacgggcacc
acgctgtatcagcacaacccacgcactcggctggtgcccgcgtccaacctcaagctgttg
accacggcggcggccatggatgtgttggggccgcactaccgcttcgccacccaactgctg
agcaatggcatgcgccagggcgaccggctgacgggcaacctgtacctgcgtggcctgggc
gacccgagcattcagtttgctgactaccaggcgctggccgcgcaattggccagccagggc
gtgcgccaggtgcagggtgacctggtgttcgacgacacctggttcgatgccgagcgcttg
ggcgtggactggtcccatgatgatgaaaccacctactacggcgcgcagatttcggcgctc
accgtggcacccaatacggattttgacgccggcagcgtgctggtcaccgccaaggcgccg
ttgcgcgtcggctcgccggtcggcgtggagatctacccgcccaccgattacctgcaactg
aataaccgcgccgtcagcgggccgggcaacagctatgggatcaaccgtcgccatggcacc
aacctgctgcagctcagcggcgcgatggcgccgggccggcagagccagcaattggtcagc
gtgtgggaaccgacgcaactggtggccaacctgtttgagcaagccttggcgcaacagggc
atcaaggtgttggggcgtcgggtgatgggcggggcgagtcccgctggggtgacggtgctg
gccgagcaccaatcggcgccgttgcaggagctgatcgtgccgctgctaaagctctcgaac
aacgccatgtccgaagccttgctcaaggccatgggccgtcagacggccaacagcggcacg
gcatcagcaggcgctgtggcggtggctgggttcctcaagcgccagggattggacaccagc
gctgtgagccaagtggacggctccggtctgtcgcggcgtaacctggtgtcgtcgcaaacc
ctcaccgacctgctgctggcggccagcaaacagccgtggttcgaggcctggtacaacgcg
ctgccggttgccggcaatgccgaccgcatgaccggcggcagcctgggttaccgcctgcgc
ggcacggctgcggaaaataacctgcatgccaagaccggctccatggccggcgtgtcgtca
ttgagcggttacctcaccgatgctcacgggcgcaagctggtgttcgcgatgctgaccaac
aactacgtggtcgccggcgcccaggtaaaagccgtggaaaaccgcgtcgccgtggccctg
tcccgcagcgaagactga
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