Pseudomonas salmasensis: HU731_023570
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Entry
HU731_023570 CDS
T07619
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00071
Fatty acid degradation
psam00280
Valine, leucine and isoleucine degradation
psam00310
Lysine degradation
psam00362
Benzoate degradation
psam00380
Tryptophan metabolism
psam00410
beta-Alanine metabolism
psam00640
Propanoate metabolism
psam00650
Butanoate metabolism
psam00907
Pinene, camphor and geraniol degradation
psam00930
Caprolactam degradation
psam01100
Metabolic pathways
psam01110
Biosynthesis of secondary metabolites
psam01120
Microbial metabolism in diverse environments
psam01200
Carbon metabolism
psam01212
Fatty acid metabolism
Module
psam_M00087
beta-Oxidation
psam_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU731_023570 (fadB)
00650 Butanoate metabolism
HU731_023570 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU731_023570 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU731_023570 (fadB)
00310 Lysine degradation
HU731_023570 (fadB)
00380 Tryptophan metabolism
HU731_023570 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU731_023570 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU731_023570 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU731_023570 (fadB)
00930 Caprolactam degradation
HU731_023570 (fadB)
Enzymes [BR:
psam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU731_023570 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU731_023570 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU731_023570 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU731_023570 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXH77383
LinkDB
All DBs
Position
5240596..5242743
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAQFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccgaccgttgctgccatcaatggcatcgcgttgggcggcggcctggaa
atgtgcctggcggcagactttcgcgtcatgtccgcgacggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggtaccgtgcgcctgccgcgcctgatcggt
gccgacaacgcgatcgaatggatcgccgcgggtaaggaaaacaaggctgaagacgcactg
aaagtcggtgccgtcgacgcggtagtagctccggacaaactggccgaagccgcgctgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaaaggtttc
gtggcaggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaagccctggaagtggaagcggcaggcttcgtcaaa
ctggcgaaaacctccgcggcccagagcctgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgaaattgccaaggacgtgaaacaggctgccgtactc
ggcgccggtatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacgggatcgagcagggcctggccgaagcggccaagctg
ctggtgggccgcgttgataaaggtcgcatgaccgctgcaaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgaaaacccgaaggtcaagcaagccgtactggctgaagtagaagcccaggtcaaa
gatgacaccatcttggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtagaagtgatccgtggcgagaagtccagcgaactggccgtggccactaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagttggtcagcgccggcgtggat
tttgtacgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggtttc
ccggaccgcatgaaagacgaccgtcgttcggctgtcgacgcactctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtggccgatccgtcggtgcacgaagtactcgctccggtcatctacgaacagcgt
gaggtgtctgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtatac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactccatcggtgtg
gcccagttcgttgccctggctgatcagtacgctgatctgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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