Pseudomonas salmasensis: HU731_023620
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Entry
HU731_023620 CDS
T07619
Name
(GenBank) DEAD/DEAH box helicase
Organism
psam
Pseudomonas salmasensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QXH77393
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Position
5252215..5255526
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AA seq
1103 aa
AA seq
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MNDLIARIVELDWQERFDPRSLERGFEYAGESRLEIVEVGKHRLIARCKGSGRNVYNQVI
THVVTSNWATVECVCSCPVAINCKHAAAALFMLTVLHEDLNRPVKQQKTPVERLSPQLEK
WLESIPEPTPVDEEQPRNTGTSLLYQLSPDPYSMRWSLELYRARVTKKGEYSDIKPLYSI
DETLRRAPAYMHELDTRICRLLLLSRSYSSYNTRYQLAGEPGAEILQLALKTQRLFIEQG
TGLALKPGPARPARFDWAMLSDGNHIPKWISNGRELDEVLPLKPLHYLDRDNLAIGVVEH
GLDDNLAIHLCALPTIPADQVALFSHRISSISKVIPPPRELTERVVDALEPQGCLTLGSD
ESYVYSQAHHRQMLTFEHRVALAYRYDACLVSGKGTEDILFLNGTETQRIQRKPVAEKAL
RKTLTKIGLKAVTRKTRALPASAGEMFGLPTDEAWLRFVERDLAVLREAGWEVVIQPGFY
YDVEAVDHWYADIEETPGHEWFNLELGVEVNGERHSLLPIMLDLMRRQPKLLDATYMAER
DDDERVLVSLGAGTHTKVALPYGRIKPLMATLGELYLRAPEGDALRLSAPDAARLSTLDA
IPLVWQGGERLRDFAKRLKEATHVNVPAPQGLNAELRGYQLEGLNWMQALRELDVGGILG
DDMGLGKTLQALAHLLCEKQAGRLQAPALAVMPTSLVPNWMDEAARFTPQLKVLALHGSQ
RQADFARLADYDLVLTTYALLSRDLEVLQPQCWSVLILDEAQNIKNPNSKAAQAARELEA
GQRLCLSGTPLENHLGELWSLFHFLMPGWLGDSKSFNRDYRTPIEKHGNAQRMQHLTARI
KPFLLRRKKEQVATELPPKSEIVHWVELSDAQRDVYETVRVAMDKKVRDEISRHGVARSQ
IIILEALLKLRQVCCDLRLVKSVPMTKAAKAGTGKLGSLMDMLEELLSEGRRILLFSQFT
SMLALIEEELKQRELEYSILTGDTLDRRTPVENFQGGKTPLFLISLKAGGTGLNLTAADT
VIHYDPWWNPAVENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQALQLEKAALADGVLE
GGASAGWKLEQRDIEALFAPLPG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctgatcgcacgtatcgtagaattggattggcaagagcgctttgaccctcgt
tcactggagcgtggtttcgagtacgctggtgaaagtcgtctcgaaatagtcgaagtggga
aaacatcggttgatcgcgcgttgcaagggctccggtcgtaacgtctacaaccaggtgatc
acacatgttgtcacatcaaattgggcgactgtcgagtgtgtgtgttcttgcccggtagcg
atcaattgcaagcacgcggctgcggcgctgtttatgttgactgtcctgcacgaagacctg
aaccggcctgtaaagcagcaaaagacaccggttgagcgcctcagcccccagctcgaaaag
tggcttgaaagcatccctgaacccacgcctgtggatgaggaacaacccaggaatacgggc
acctctttgctgtaccagctctcccccgatccctattcgatgaggtggtcattagagcta
tatcgagcgcgcgtgacgaaaaaaggtgagtacagcgatatcaagccgctgtactcgatc
gacgagacattgcgacgtgctcccgcctatatgcatgagctggatacacgcatttgtcga
ttgctgttgttgagccggtcttatagttcctataacacccgttatcagctggccggcgaa
ccaggggccgaaattctccaattggcgctcaaaacccaacgtctgtttattgagcagggc
actggcctggcgcttaagcccggcccggcccggcccgcgcgttttgattgggccatgttg
tccgatggcaatcacattcccaagtggatcagcaacgggcgcgagttggacgaggtattg
cccctcaaaccgcttcattatcttgaccgcgataacctggctatcggggtggtcgagcac
gggctggacgataatctggccattcatctttgcgccttgccgacgattccagctgatcag
gtcgcgttattcagccatcgcatcagttcgatatccaaggtgattcctccgccgcgggag
ctgaccgagcgtgtggtggatgcgttagagcctcaaggatgcctcaccttgggaagcgac
gagtcctacgtctacagccaggcacaccatcggcaaatgctcacgtttgaacaccgcgtc
gccttggcttaccgatacgacgcctgcctggtcagcggcaaaggcactgaggacatcctg
tttctcaacggcactgaaacccaacgtatccaacgcaagccggtggctgaaaaagccctg
cgcaagaccctcacgaagatcggccttaaagcggtcactcgcaaaacccgtgcgctgcct
gccagtgcaggagagatgttcggtctacccactgatgaagcctggctgcgctttgttgag
cgcgatctggcggttttgcgcgaggccgggtgggaggtcgtcatccaaccgggcttttat
tacgacgtggaggctgtggaccactggtacgcggatatcgaagagacgccgggtcatgaa
tggttcaaccttgaactgggcgtcgaggtcaatggcgagcggcacagcctgttgccaatc
atgctcgatttgatgcgtcgtcagcccaaactgctcgatgccacttatatggctgaacgt
gacgacgatgagcgagtattggtcagtttaggcgccggcactcataccaaagtcgcgctg
ccttacggccgtatcaaacccctgatggcgaccctcggcgaactctacctgcgcgcacct
gaaggcgatgcactgcggttgagcgcgcccgacgcggcacggctcagcaccctggatgca
atacccttggtctggcagggcggcgagcggctgcgtgatttcgccaagcgtctcaaggag
gccacgcacgtcaatgtaccggctcctcagggcctgaacgccgaactacgtggctaccag
ctcgaaggccttaactggatgcaagccctgcgcgagctggacgtcggcgggattcttggg
gatgacatgggcctggggaaaaccctgcaggcccttgcccatttgctctgtgagaaacag
gccggccgcttgcaggctcctgctctggcggtgatgcccaccagcctggtccccaactgg
atggatgaagccgcacgctttacccctcaactcaaggtcctggcgctgcacggctcgcag
cgccaggctgacttcgcgcgcctggccgattacgacctggtactcaccacttacgcgctg
ctgtcgcgagaccttgaagtgctgcagcctcaatgttggagtgtgctgatcctcgacgaa
gcgcaaaacatcaagaatcctaatagcaaggcagcccaggcggctcgtgagttggaggcc
ggtcagcgtttatgcttgagcggtacgccgttggaaaaccacttgggcgagctgtggtca
ctgttccatttcttgatgccgggctggttgggcgatagcaagagctttaatcgcgattac
cgcacgcccatcgaaaagcacggtaatgcgcagcgtatgcagcacctcacagcacgtatc
aagccgttcctgttgcggcgcaaaaaggaacaggttgctacggagttaccgcccaagtcg
gaaatcgtgcactgggtagagctcagcgatgcacagcgggatgtctacgaaacggtgcgt
gtggccatggataaaaaggtgcgcgacgagatcagtcgtcatggcgtggcccgcagccag
atcatcatcctcgaagccctgctcaaactgcgccaggtgtgctgtgacttgcgcctggtc
aagtctgtgccgatgactaaagctgccaaggccggcactggcaagctcggcagcttgatg
gacatgttggaagagttgctcagcgaggggcggcggattttgctgttctcgcaattcact
tcgatgctggcgttgattgaagaagagctcaagcagcgtgagcttgagtattcgatcctg
acgggggacacccttgaccgacgtacgcccgttgaaaacttccagggcggcaagacaccg
ctattcctgatcagcctcaaggcgggcgggacgggcttgaacctgacagcggcggatacg
gtgattcattacgacccgtggtggaaccctgcggtggaaaaccaggcgaccgaccgtgcg
tatcgcatcgggcaggacaaaccggtgtttgtgtacaagatgattgcccggggcacggtg
gaggaaaagatccaggcgttgcaactggagaaggctgcgttggctgatggggtgctggaa
ggcggagccagtgcgggttggaagctggagcagcgggatattgaggcgctgtttgcgcct
ttgccaggttga
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