Pseudomonas salmasensis: HU731_024230
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Entry
HU731_024230 CDS
T07619
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00521
Streptomycin biosynthesis
psam00523
Polyketide sugar unit biosynthesis
psam00541
Biosynthesis of various nucleotide sugars
psam01100
Metabolic pathways
psam01110
Biosynthesis of secondary metabolites
psam01250
Biosynthesis of nucleotide sugars
Module
psam_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU731_024230 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU731_024230 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU731_024230 (rfbC)
Enzymes [BR:
psam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU731_024230 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Polysacc_synt_C
Cupin_7
Cupin_1
PB4_spike
Motif
Other DBs
NCBI-ProteinID:
QXH77507
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Position
5377198..5378175
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AA seq
325 aa
AA seq
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MKFIETKLAGVVIIEPKVFADDRGWFMESFNEPLFHEQLAEFGHPIPRPFVQDNHSCSKK
HVLRGLHFQRDPHAQGKLVRVTAGSAYDVAVDIRKGSETFGQWLGVELSAKNGRMLWIPE
GFAHGFLALEDNTEFLYKTTDTYSKACEQSINWNDPAIGIQWPVTEGLIISQKDEEAPLL
SEVVASVSALTGNVTSSELQVIGDDRGSLIALEQGRDIPFDVRRAYYIFNTKAGISRGSH
AHFRLEQYIICLSGKCRILIDDGVTQESIWLDAPNKAIHIKKLIWREMHDFSEDCVLLVF
ASNHYDEGDYLRNYDDFMRAVKRYA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatagaaaccaagctggccggtgtggtcatcattgagccaaaagtattcgcg
gatgaccgtggatggtttatggaaagtttcaatgagccgttgtttcatgaacaactcgcc
gagtttggtcaccccattccgcgcccattcgtgcaagacaatcactcctgctcaaaaaag
cacgtcttaagagggcttcattttcagcgtgatcctcatgcccagggcaagttggtacga
gttaccgcaggtagcgcctatgacgtggcggtggatatcagaaagggctcggaaacattt
ggtcagtggctaggggttgaactctccgcaaaaaatggccggatgctttggattccagaa
gggtttgcacacggctttttggcgttggaggacaatactgagtttctctacaagaccaca
gatacctattccaaggcttgtgagcaatcgatcaactggaatgaccccgccattggcatc
caatggccagtgactgaagggttgatcatcagtcagaaggatgaagaggcaccgttgctc
tcggaagtagtggcctctgtttcggcactgacgggcaatgtgacgtcgagtgagttgcaa
gtaattggagatgatcgtggcagcctgattgccctggagcaagggcgcgatattccgttc
gacgtcaggcgagcctattatattttcaataccaaggcgggtatcagcagaggctcgcat
gcgcatttcaggttggagcagtacattatctgcttgtcgggcaaatgcagaattctgatc
gatgacggcgtgacgcaggaatcgatatggctggatgccccgaataaggccattcacatc
aagaaactgatttggcgcgagatgcacgacttcagtgaagattgcgttttgctggtattc
gcaagcaatcattacgatgaaggcgactatttgcgaaattacgatgatttcatgcgtgcg
gtgaaacgatacgcttga
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