Pseudomonas salmasensis: HU731_026215
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Entry
HU731_026215 CDS
T07619
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
psam
Pseudomonas salmasensis
Pathway
psam02025
Biofilm formation - Pseudomonas aeruginosa
psam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU731_026215 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU731_026215 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psam02044
]
HU731_026215 (tssM)
Secretion system [BR:
psam02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU731_026215 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXH77875
LinkDB
All DBs
Position
complement(5820915..5824553)
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AA seq
1212 aa
AA seq
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MKTVWSYLKRGGLPVLRQFNQAWPVLVLLGVMFLLVAIWWLGPQWTWRERQPLGELAMRV
SASVVVIVVPLLIWAWRVRERYQRLQVERQHEAAVQADPCLPYIEDQERALDRSLGNLLN
NMERRRSLYQLPWYLVLGEENAGKTSLITRSNQSFSLSHVTKAGVRAQEEQLAYPVDWWI
GDEAVLIDPPGEFLSHPDSPAENVEQQGKVKPVLPSGTHARLWSHLLDWLTRNRSRRALN
GVVLVIDIQTLLAQRPEQRKAHANLLRTRLFELTRQLGTRLPVYVTLSKFDLLEGFEEFF
ARLSRSGREDLLGFTFSLAAVDDFDAWLAELTRQYQVFVDCLCEQVFNSTREARTLDECD
RLQALMHQMAGLRPALFGFLTEMLGSDRFTTPALVRGLYFSSVLQQGALSNAFIKEAGQA
YQLPPPPPEVKPAGGTAIYFAQQLFQRVIYPEAGLAGDNIKVARSKRRLLIAGFSVASLG
CLVVVGTWQFYFDINRDKAANVLAKSQEFSERDIDATVDPTGRNLLLPLDQIRDAVLVYG
DYREAWPLLSDMGLYQGRAIGPTVDEAYLNLLSKRFLPAIASGVLEAINTAPAGSNQQLA
ALRVYRMLEERPNRRPAIVEEWVAKQWQRAYPGQGQLQADLMGHLGYALKYADADLPNYR
ERITQVQQQLRQLPMAERVYMSLKQDALERMHRPLDLRTEVGPAFDIVYRALNTDQAGSG
LQLPPLLTAKGFKDYFEPGTKGIIELAMIDQWVLGERQRLDYSDEDRNVLTQRIRALYSA
DYVDSWRRALNQFAVTDFDDLSHGVAVLEQVTGPAAPLRRLLETLRDNSVIYPAVPLAEG
QAPLKLDKVPEGQQQAAGIRRAFSSLSELITARGEQPSYYEETLRSVSAVYDYAKAVHDN
PDPGKAALKTVLNRFSLGGADPIANLQRVAVGLPEPLNQQVKKLADQTSQVLVIAALREL
EKRWDSEIYSFYRERLAGRYPFKASGEDASLEDFEAFFGPQGRLQQFHDQFLNVFLKDNL
DALYSDSLGGYLVRSDVLEQLKKAERIRDTFFNHRGHLAVQLTIEPLALSATRLSSMLSV
DGQLIPYQHGAPQRTGLVWPNSLGNSNGSQLTLVHSTGNTASLSYRGPWSLFRLLSRGHL
NGRTDTSVDLTFSVADGLMRYRIGAEKANNPITQRSFEGFVLPRTLLEERKTKRDVNKVG
GVAAIAFSEERP
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtctggagttacctcaaacgcgggggcctgccggtgctgcgccaattcaac
caggcatggccggtgttggtgctgttgggcgtgatgttcttgctggtcgccatctggtgg
ctgggcccgcagtggacgtggcgtgagcgccaaccgttgggcgagctggcgatgcgggtc
tcggccagtgtggtggtgatcgtggtgccgctgctgatctgggcgtggcgcgtgcgcgag
cgttatcagcgtttgcaagttgagcgccagcacgaggctgccgtgcaggccgacccttgc
ttgccttatatcgaagatcaagagcgggcgctggaccgcagcctgggcaatttgctcaac
aacatggagcgccgtcgttcgctgtatcaactgccgtggtacctggtgctcggtgaggag
aatgctggcaagaccagcctgatcacgcgctccaaccagagcttttccttgtctcatgtg
accaaggctggggtcagggctcaggaagagcaattggcctatccggtggattggtggatc
ggggacgaggcggtgttgattgacccgccgggtgaatttctcagccacccggattcaccg
gctgaaaacgttgagcagcagggcaaggtcaagccggtgttgcccagcggcactcatgcg
cgcctttggtcgcatctgctcgattggctgacgcgcaaccgcagccgtcgggcattgaac
ggcgtggtgctggtaattgatatacagaccttgttggcgcaacgtcccgaacaacgcaag
gcccacgccaacctgctgcgcacccggctgtttgagctgacgcggcaattgggcacgcgc
ttgccggtatacgtgacgctgagcaagttcgacctgctggaaggcttcgaagaattcttc
gccaggttatcgcgcagtggccgcgaagacctgctgggtttcacgttcagcctggccgcg
gtggatgattttgatgcctggctggcggaactgacgcgtcaatatcaagtgtttgtcgac
tgcctctgcgaacaggttttcaacagcacccgggaggcgcgtacgttggatgagtgtgat
cgcttgcaagcgctgatgcatcagatggcgggcttgcgccccgcgttgtttggcttcctg
accgagatgcttggcagtgatcggttcaccacacccgcgttggtgcgcgggctgtatttt
tcctcggtgttgcagcagggcgctctgagcaacgctttcatcaaagaagcagggcaggcg
tatcaactgccaccaccgccaccggaggtcaaaccggccggtggcacggctatctacttt
gcccagcaactgttccagcgggtgatctaccccgaagcgggcttggcgggcgacaacatc
aaggtggctcgcagcaaacggcggctgttgatcgccgggttcagcgttgcgtctttgggg
tgtctggtggtcgtcggcacctggcagttttacttcgatatcaaccgcgacaaagcggcc
aacgtgttggccaagagtcaggagttcagtgagcgagacatcgacgccacggtcgaccct
acggggcgcaacctgttgctgcctctggaccagattcgcgatgcggtgttggtctacggt
gattaccgtgaagcctggccgttgttgtcggatatgggcttgtaccagggcagggcgatt
ggtccgacggtggatgaggcctatttgaatctgctgtccaagcgcttcctgccagccatt
gccagcggggtgctggaggcaattaacaccgcgcccgccggcagcaatcagcaactggca
gccttgcgcgtgtatcgcatgctcgaagagcgccccaaccgccgcccggcgattgtcgag
gagtgggtcgccaagcaatggcaacgcgcctatccgggccagggccagttgcaggccgac
ttgatgggccacctgggctacgcgctgaaatacgccgatgccgacctgccgaactaccgc
gaacgcatcactcaagtgcagcagcaactgcgccagttacccatggctgaacgggtgtat
atgagcctgaaacaggatgctctggagcgtatgcatcggccgctggacctgcgcacagag
gtcggcccggcgttcgatatcgtctaccgtgcgctgaacaccgatcaagccggcagcggt
ctgcaattgccgccgctgctcaccgccaagggtttcaaggactacttcgaacccggtacc
aagggcatcatcgaactggcgatgatcgaccagtgggtccttggcgaacgacaacgcctg
gactactccgacgaagaccgcaacgtgctgacccagcgtatccgcgccctgtacagcgcc
gactacgtcgacagctggcggcgtgcgctgaaccagttcgcggtgaccgactttgacgac
ctcagccacggcgtggcggtgctggaacaagtcaccggcccggccgcaccgctacgacgc
ctgttggaaaccctgcgtgacaacagcgtgatctacccggccgtgcccctggctgaaggg
caagcgccgctcaaactggataaggtgcccgaggggcaacaacaggcagcagggattcgg
cgcgcattctcaagtctgtcagagctgatcaccgcacgaggcgagcagccgtcctattac
gaagaaaccctgcgttcggtcagcgccgtctatgactacgccaaggccgtgcacgacaac
ccggaccccggcaaagcagcccttaaaactgtgctcaaccgcttctccctgggcggcgcc
gaccccatcgccaacctgcaacgcgtcgccgtggggctgcccgaaccattgaatcagcag
gtcaaaaaactcgccgaccaaacctcgcaagtgctggtgatcgccgccctgcgcgagctg
gaaaagcgctgggacagtgagatctacagcttctatcgcgagcgcctggcgggccgctac
ccgttcaaggccagtggcgaggacgcctcgctggaagacttcgaagccttcttcggcccg
caggggcgtctgcagcagttccacgaccaattcctgaacgtgttcctcaaggacaacctc
gatgccctgtactccgacagcctcggcggctacctggtacgcagcgacgtgctggaacaa
ctgaaaaaggccgagcgcatccgcgacacctttttcaaccaccgcggccatctggccgtg
caactcaccatcgaacccctggccctgagcgccactcgcctgagcagcatgctcagcgtc
gacggccaactgatcccctaccagcacggcgcgccgcaacgcacgggactggtgtggccc
aacagcctgggtaacagcaatggcagtcaactgactctggtgcacagcaccggcaacacc
gccagcctgagctaccgcgggccgtggtcgttgttccggctgctgagtcgcgggcacctc
aatggccgcaccgacaccagcgtggacctgaccttctcagtcgccgatgggttgatgcgt
tatcggataggcgcggagaaggctaataacccgattacacagcgcagttttgaagggttt
gtgttgcccaggaccttgttggaagagcgtaaaacgaagagggacgtgaacaaggttggg
ggtgtggccgcaatagctttcagcgaggagcggccctaa
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