Pseudomonas salmasensis: HU731_026255
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Entry
HU731_026255 CDS
T07619
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psam
Pseudomonas salmasensis
Pathway
psam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU731_026255 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psam02044
]
HU731_026255 (tssC)
Secretion system [BR:
psam02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU731_026255 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
DUF4226
Motif
Other DBs
NCBI-ProteinID:
QXH77881
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All DBs
Position
5834416..5835894
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AA seq
492 aa
AA seq
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MPRESSAAQVLVADEQSSLLDQLLANTTIRPSQEGYAVARQGVAAFISEILQSGDHQQPV
NKHRVDQMIAEIDRALSKQMDVILHQPQLQQLESAWRGLKLLVDRTDFRENIKLEMLHVT
KEELLDDFDNAGDITRSGLYKHVYTAGYGQFGGEPVGAIVGNYTFGPSSPDIKLLSYVAS
IGAMSHAPFVSAAGPELFNLEGFQGLPDLKEINDIFDDPRHTKWRGLRESEDARHLALTL
PRFLLRTPYSTEDNSARSFGYNETVDGNHDNYLWGNTAFLMASRITDSFARYRWCPNIIG
PQSGGAVDDLPVHLYESFGQLQAKIPTEVLISDRKEFELAEAGFIPLTMRKDSDNAAFFS
ANSVQKPKNFPKTREGQEAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERQDLE
SELNTWLKQYIADQENPSTDVRSRRPLRAAKIEVQDVEGNPGWYQVSLAIRPHFKYMGAN
FEISLVGRLDTQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctagggaaagtagtgccgcccaagtactggtcgccgatgaacagtcgtcgttgctc
gatcaattactggccaataccaccatccgcccgtcccaggaaggctatgccgtggcccgc
caaggcgtggctgcgttcatcagcgagatcctgcaaagcggtgatcaccagcagccggtc
aacaagcaccgggttgaccagatgattgccgagatcgaccgcgcgttgagcaagcaaatg
gatgtgatcctgcatcagccgcagctccagcaactggaatcggcctggcgtgggctgaaa
ctgctggtggaccgcacggactttcgcgaaaacatcaagctggaaatgctgcatgtcacc
aaggaggagttgctggacgacttcgacaacgccggcgatatcactcgcagcggcttgtac
aagcacgtctacaccgccggctacggccagttcggcggtgagccggtgggtgccattgtc
ggcaactacacctttggtcccagctcgccggacatcaagttgctcagctatgtagcctcc
atcggtgccatgtcccatgcgccgtttgtgtcggcggccgggccggaactgttcaacctc
gaaggcttccagggcctgcccgacctcaaggagatcaacgatattttcgacgacccccgc
cacaccaaatggcgcggcttacgcgagtccgaagacgctcgtcatttggccctgaccttg
ccgcgtttcttgctgcgcacgccctacagcactgaagacaattcggcccgcagcttcggc
tacaacgaaaccgtcgacggcaaccacgacaactacctgtggggcaacaccgcgttcctg
atggcctcgcgcatcaccgacagcttcgcccgctaccgctggtgcccgaacatcatcggc
ccacagtccggtggtgcggtggatgatctgccggtgcacctgtacgaatccttcggccag
ctgcaggccaagatccctactgaagtgttgatttccgaccgcaaggaattcgagctggcc
gaagccggttttatcccgctgaccatgcgcaaagacagcgacaacgcggcattcttctcc
gccaactcggtgcagaaacccaagaattttcccaagacccgcgaaggccaggaagcccag
accaactacaagctcggcacccagttgccgtacctgtttatcgtcaatcgcctggcccac
tacatcaaggtgctgcaacgcgagcagatcggtagctggaaggaacgccaggatctggaa
agcgagctgaacacctggctcaaacagtacatcgccgatcaggagaacccgtcgaccgat
gtacgcagccgtcgtcccttgcgcgccgcaaaaatcgaagtgcaggacgtcgagggcaac
ccgggctggtaccaggtgtcgttggcgatacggccgcacttcaagtacatgggggccaac
ttcgagatctccctggtcggtcggctggacacccaataa
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