Pseudomonas salmasensis: HU731_027630
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Entry
HU731_027630 CDS
T07619
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psam
Pseudomonas salmasensis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psam03000
]
HU731_027630
Transcription factors [BR:
psam03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU731_027630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_4
PAS_8
AAA_2
AAA
Mg_chelatase
HTH_50
PAS
PAS_7
MCM
ATPase
Diguanyl_cycl_sensor
Cons_hypoth95
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QXH78132
LinkDB
All DBs
Position
complement(6149375..6151336)
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AA seq
653 aa
AA seq
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MTQAFSVQDLEYLTNLGPAALSDGPIAALEQAWRECLAGQVVRPDGVRQVIWDSWRRSVE
AGIEPGNSDYCFVAPQALAATLAHHRALIAAAAQVMHGLLAYNPRGHINLTDAEGTTLYF
CGLDITPVGSRLLESVQGTNCTGLALAEDRLVYVLAEENFASGLRQRHMHCAAAPIKDAQ
GQTLAMLTLTAEPGWFHFHTLGTVQAAAEAVSRQMALQVLLEEQQAVLEVLNEGLVVLDE
RGCIKALNRYARQLFGVGRELIGSPFQRLGRSELSDALGEPVRDRDCTFHLHDGSQLACL
VSVCPLEQGGVIVSVRENRRIREITRRIIGTQARYTFETILGTSRAIQDALHLGRIASRS
ESTTLILGESGTGKELFAQAIHNGSERCNGPFVAVNCGAIPRDLVQSELFGHVEGAFTGS
ARGGAAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEITRVGAKQSRQVDVRIIAA
THRNLSQAVAEGAFREDLYYRLNVLNLSVPPLRMRRDDIPLLARHFLQRCARSLRKTVQG
FAPDALALLSAHGWPGNVRELENVIERATNLAMSELIQSADLPLETEQRTTLRAYQPQPA
QDLSSHEMHAIVAALTSTRGNIRLAAQQLDVSRGGLYNKMNRFGLSAADFRER
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcgtttagtgtgcaagacctcgaatacctcacgaacctggggccggccgcg
ctgagcgacgggcccatcgccgccttggaacaggcgtggcgagagtgcctggctggccag
gtcgtgcgtcccgacggggtgcgccaggtcatctgggattcctggcgacgcagtgtcgag
gcgggtatcgagcccggtaacagcgactactgctttgtcgcgccgcaagcactggcggcg
accctggcccaccatcgcgccctgatcgccgctgccgcgcaggtcatgcatggattgctg
gcttacaacccgcgcgggcatatcaacctcacggatgccgagggcacgactttgtatttc
tgtgggctggacatcaccccggtaggcagtcgcttgctcgaatcggtgcaaggcactaac
tgcaccggcctggccctggccgaagatcgcctggtgtatgtgctggctgaagaaaatttc
gccagcggcctgcgccagcgccacatgcactgcgccgccgcgccgatcaaagatgcccaa
ggccagaccctggccatgctcaccctgaccgccgagcccggctggtttcatttccatacc
ctgggcaccgttcaagcggcggccgaagcggtgtcgcggcagatggcgctgcaggtgttg
ctggaagaacaacaggctgtgctcgaagtgctcaacgaaggcttggtggtgctcgatgag
cgtggctgcatcaaggcactcaaccgttatgcgcggcaactgttcggggtggggcgcgag
ttgatcggcagtcctttccagcgcctgggccgcagtgaattgagcgacgcgctgggtgag
ccggtgcgcgaccgcgattgcaccttccacttgcacgacggcagccaactcgcctgcctg
gtttcggtatgcccgctggagcagggtggggtgattgtgtcggtgcgcgaaaaccgccgt
atccgcgagattacccggcgcattatcggcacccaggcccgctataccttcgagaccatc
ctgggcacctcgcgggccatacaagacgccctgcacctggggcgcattgccagtcgcagc
gagtccaccaccttgatcctcggcgaaagcggcaccggcaaggagctgtttgcccaggcc
attcataacggcagcgagcgttgcaacggcccgtttgtggcggtcaactgcggcgcgatc
ccacgggacttggtgcagagcgaactgttcggccacgtcgaaggtgcgttcaccggctcg
gcgcggggtggggcggcaggcaagttcgaactggcggatggcggcaccatcttcctggat
gaaatcggcgatatgtccttcgatgcccaggtcagtctgctacgggttttgcaggagggt
gagatcacccgcgtcggggccaagcaatctcggcaagtcgacgtgcgcatcatcgccgcc
acccatcgcaacctgagccaggcggtggccgagggcgcgtttcgtgaagacctttactac
cgactcaacgtgctgaacctgagcgtgccgccactgcgtatgcgccgtgacgatatccca
ttgctggcacggcacttcctgcagcgctgtgcccgctcgctacgtaaaacggtgcaaggt
ttcgcgcctgatgcgttggcgttgctgtcagcccatggttggccgggcaacgtgcgggag
ctggaaaacgtcattgagcgggcgaccaacctggcgatgagtgagctgattcaatcggct
gatttgccgttggaaaccgagcaacgcaccacgttgcgcgcctaccagccccagcccgcg
caggatttgagcagccatgaaatgcacgccatcgttgccgcgctcaccagcacccgcggc
aacattcgcctggccgcacagcaactggatgtgtcgcggggcgggctgtacaacaagatg
aatcgctttggcttgagcgccgccgatttccgtgagcgctga
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