Paracoccus sanguinis: HGN31_05600
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Entry
HGN31_05600 CDS
T07521
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psan
Paracoccus sanguinis
Brite
KEGG Orthology (KO) [BR:
psan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psan03032
]
HGN31_05600 (topA)
03400 DNA repair and recombination proteins [BR:
psan03400
]
HGN31_05600 (topA)
Enzymes [BR:
psan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGN31_05600 (topA)
DNA replication proteins [BR:
psan03032
]
Prokaryotic type
DNA Topoisomerases
HGN31_05600 (topA)
DNA repair and recombination proteins [BR:
psan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGN31_05600 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QJD16425
LinkDB
All DBs
Position
complement(1167855..1170662)
Genome browser
AA seq
935 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDTDADFAMTWEVAADSKK
HVKAIKDALARDPNLILATDPDREGEAISWHLKEALASSLKKAQVSRVTFNAITKSAVTE
AMAHPREIDQPLVDAYLARRALDYLVGFNLSPVLWRKLPGSRSAGRVQSVALRIIVDREM
EIEAFRAREYWSVHAALATPSGAPYQAQLVSYAGKKLERFDLADAERAALAVAAVESRDL
TVTSVASKPASRNPWPPFMTSTLQQEASRKLGMGAKACMGAAQRLYEAGYITYMRTDGID
MAPEAVMAARDAIKARFGADYLPASPRMYKNKAKNAQEAHECIRPTDMMRSPDKLSAEPE
QKRLYDLIWKRTLASQMEAARMERTTVEIGSADGQVGLRATGQVMLFDGFLKVYDQGHDD
GEDGEDSARLPQIAQGEPAAKVAGGFAGELDAGSEGLVADAARAVLGRQHFTQAPPRYTE
ATLVKRMEELGIGRPSTYASIVTTIQDRDYVRKDKNRLIPEDKGRLVTIFLTKYFPRYVS
YDFTADMEGELDDISSGSREYREVLRRFWRDFTAALAGTSELRISEVLTAIDEALAPHLY
PPRADGGDPRECPLCHRGRLNLKTARSGGAFIGCSNYPECRYTRPLSGPEGEALGDAVLG
TDPEGREISLRNGRFGPYVQRGEATAEVPKPPRASIPKGWEAASVDLERALMLLDLPREI
GPHPEDGVVVEAGIGRYGPFVKHGAKYANLPEVDEVFTIGMNRAVEVLAQKASRGRAPAA
APLAELGEHPDGGPVQVLNGRFGPYVKWGKVNATLPRDMAPEAVTLEAALELIAAKAAKG
GKAPRKAAAKKPAAKASTTKAGAAKKPAAKKTTAKAGTAKAAAKKPAAGKAAATSDAAED
AAPVKAAAKKPAAKSATKAKPAAKPKAAKPADPAD
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatcccccgccaaggccaagacgatcaacaagtatctgggc
gacgactacaccgtcctggcctcgttcggtcacgtccgcgacctgccgcccaaggacggc
tcggtcgataccgacgccgatttcgccatgacgtgggaggtcgcggcggactcgaagaag
cacgtcaaggcgatcaaggatgcgctcgcccgcgacccgaacctgatcctcgccaccgac
cccgaccgcgagggcgaggcgatctcgtggcacctcaaggaggcgctggcctcgtcgctg
aagaaggcgcaggtgagccgcgtcaccttcaacgccatcaccaagagcgccgtgaccgag
gcgatggcccacccgcgcgagatcgaccagccgctggtcgacgcctatctggcccgccgg
gcgctggattacctcgtcggcttcaacctgtcgccagtgctgtggcgcaagctgcccggc
tcgcgctcggcggggcgggtgcagtcggtggcgctgcgcatcatcgtcgaccgcgagatg
gagatcgaggcgttccgggcccgcgaatactggtccgtccacgccgcgctcgccacgccc
tcgggggcgccctatcaggcccagctggtcagctacgccggcaagaagctcgagcgcttc
gacctcgccgacgccgaacgcgccgcgctggcggtcgccgcggtggaaagccgcgacctg
acggtgacctcggtcgcctcgaaacccgcgagccgcaacccgtggccgccgttcatgacc
tcgaccctgcagcaagaggcgtcgcgcaaactcggcatgggtgccaaggcctgcatgggc
gcggcgcagcggctctatgaggcgggctacatcacctacatgcggaccgacgggatcgac
atggcgcccgaggcggtgatggccgcccgcgatgcgatcaaggcgcggttcggggcggac
tacctgccggcctcgccgcggatgtacaagaacaaggccaagaacgcgcaagaggcgcat
gagtgcatccgtccgaccgacatgatgcgctcacccgacaagctgtcggccgagcccgag
cagaagcgcctttacgacctgatctggaagcgcacgctggcaagtcagatggaagccgcg
cggatggagcgcaccaccgtcgagatcggctcggccgacggccaggtggggctgcgcgcg
accgggcaggtgatgctcttcgacgggttccttaaggtctatgaccagggccacgacgac
ggcgaggacggcgaggacagcgcccgcctgccgcagatcgcccagggggagcccgcggcc
aaggtcgcaggcggctttgcgggcgaactcgacgccgggtccgaggggctggtcgccgac
gccgcccgcgccgtgctgggccgccagcatttcacccaagccccgccccgctataccgag
gcgacgctggtcaagcggatggaagagctcggcatcggccggccctcgacctatgcctcg
atcgtcaccacgatccaggaccgcgactatgtgcgcaaggacaagaaccggctgatcccc
gaggacaaggggcggctcgtcaccatcttcctgaccaagtatttcccgcgctacgtctcg
tacgacttcaccgccgacatggagggcgagctcgacgacatctcctcgggctcgcgcgag
taccgcgaggtgctgcggcggttctggcgcgacttcaccgcggcgctggcggggacgagc
gagctgcgcatctccgaggtgctgacggcgatcgacgaggccttggcgccgcatctctac
ccgccgcgggcggacgggggcgatccgcgcgaatgtccgctctgccaccgcgggcggctg
aacctcaagacggcgcgctcgggcggggcgttcatcggctgctcgaactaccccgagtgc
cgctacacccggccgctctcgggccccgagggcgaggcgctgggcgatgcggtgctgggc
accgaccccgagggccgcgagatcagcctgcggaacggccgtttcgggccctacgtccag
cgcggcgaggcgacggccgaggtgcccaagccgccgcgcgcctcgatccccaaggggtgg
gaggcggcgagcgtcgacctcgaacgggcgctgatgctgctggacctgccgcgcgagatc
ggcccgcaccccgaggacggggtggtggtcgaggccgggatcgggcgctacgggccgttc
gtcaagcacggggcgaaatacgccaacctgcccgaggtggacgaggtgttcaccatcggc
atgaaccgcgcggtcgaggtgctggcgcagaaggcctcgcgcgggcgggcgccggcggcg
gcgccgctggcggagctgggcgagcacccggacggcgggccggtgcaggtgctgaacggg
cggttcgggccctacgtgaagtggggcaaggtcaacgccaccctgccgcgcgacatggcg
cccgaggcggtgacgctcgaggcggcgctggagctgatcgcggcgaaggccgcgaagggc
ggcaaggcgccgcgcaaggcggcggcgaagaagccggcggcgaaggccagcacaacgaag
gctggtgcggcgaagaagcctgcggccaagaagaccacggcgaaagccgggacggccaag
gccgccgcgaagaagccggcggccggcaaggcggcggccacgtcggatgccgcagaggat
gcggcgccggtcaaggccgcggcgaagaagcccgccgccaaatccgcgaccaaggccaag
cccgccgccaagcccaaggcggccaaacccgccgaccccgccgactga
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