Paracoccus sanguinis: HGN31_09390
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Entry
HGN31_09390 CDS
T07521
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psan
Paracoccus sanguinis
Pathway
psan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HGN31_09390 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psan03021
]
HGN31_09390 (rpoC)
03400 DNA repair and recombination proteins [BR:
psan03400
]
HGN31_09390 (rpoC)
Enzymes [BR:
psan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HGN31_09390 (rpoC)
Transcription machinery [BR:
psan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HGN31_09390 (rpoC)
DNA repair and recombination proteins [BR:
psan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HGN31_09390 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QJD17053
LinkDB
All DBs
Position
1965771..1969994
Genome browser
AA seq
1407 aa
AA seq
DB search
MNQELSTNPFNPVPAPRQFDEIKISLASPEEILAWSFGEVKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGLTCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLLTEEEFMDAQDQFGVDAFT
ANIGAEAIREMLAAIDLQATADQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWM
VLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGYSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMMREGMKGEGMAFGSVDEVEHAL
AAGEVHLHAKITARIPQIDEDGNEVIRRVETTPGRLRLGALLPKNAKAPFELVNRLLRKK
DVQNVIDTVYRYCGQKESVIFCDQIMGMGFREAFRAGISFGKDDMVVPDNKWTIVEEVQD
QVKEFEQQYLDGLITQGEKYNKVVDAWSKCNDRVTEAMMATISSSKRDENGAEAEPNSVY
MMAHSGARGSVSQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIIREHDCGTDRAITASAAVNDGEVIAPLSERVLGRV
AAEDVLVPGSGEVLVRHNELIDERKADAIEAAGVQTVRIRSALTCEAEDGVCALCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFIAANQDGTVKFENEA
VLENASGELIVMSRSMQLHVMNDQGTALATHKLFYGSKLMVRDGDKVTRGQKMFEWDPYT
LPIIAEQAGVARFVDLLSGLSVRDETDDATGMTQKIVTDWRSAPKGNDLKPEIIIMGEDG
EPVRNDQGNPISYPMSVDAILSIEDGQEVKAGDVVARIPREGARTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVKFGKDYKNKRRIIVQPTNEDLEPVEYMVPKGKHIPVQEGDFVQ
KGDYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIE
ILDSGDTTLLKGEHVDRDEFDEENAKIEARGGRPATGEPVLLGITKASLQTRSFISAASF
QETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATARIKRIAEDRDNEVIEMRRA
EAEAVAALAAEVTPIEHAEEIITSPEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactttccaccaatccgttcaatcccgtcccggcgccgcgccagttcgac
gagatcaagatctcgctggccagccccgaggaaatcctcgcctggtccttcggcgaggtg
aagaagcccgagacgatcaactaccgcacgttcaagcccgagcgtgacgggttgttctgc
gcgcgcatcttcggccccatcaaggactacgagtgcctgtgcggcaagtacaagcgcatg
aagtatcgcggcctgacctgcgagaaatgcggcgtcgaggtgacgctgcagaaggtccgg
cgcgagcgcatgggccacatcgagctggccgccccggtcgcccacatctggttcctcaag
tcgctgccgtcgcgcatcggcctgatgctggacatgacgctgcgcgacctcgagcgcatc
ctctactttgaaaactacgtcgtcatcgagccgggtctgacggacctcacctacggtcag
ctgctgaccgaggaagagttcatggacgcgcaggaccagttcggcgtggacgccttcacc
gccaacatcggcgccgaggcgatccgcgagatgctggccgccatcgacctgcaggcgacc
gccgaccagctgcgcgaggagctgaaggaggcgaccggcgagctgaagccgaagaagatc
atcaagcggctgaagatcgtcgaatcgttcctcgagtcgggcaaccggcccgagtggatg
gtgctgaccgtgatcccggtcatcccgccggaactgcgcccgctggtcccgctggacggc
ggccgcttcgccacctcggacctgaacgacctctaccgccgggtcatcaaccgcaacaac
cgcctcaagcggctgatcgagctgcgcgcgcccgacatcatcgtgcgcaacgagaagcgg
atgctgcaggaatcggtcgacgcgctgttcgacaacggccgtcgcggccgcgtcatcacc
ggcaacaacaagcgcccgctcaagtcgctgtcggacatgctcaagggcaagcagggccgg
ttccgccagaacctgctcggcaagcgcgtggacttttcgggccgctcggtcatcgtgacg
ggcccggagctcaagctgcaccagtgcgggctgcccaagaagatggcgctcgagctgttc
aagccgttcatctactcgcggctcgaggccaagggctattcgtccaccgtcaagcaggcc
aagaagctggtcgagaaggagcgtcccgaggtctgggacattctggacgaggtgatccgc
gagcacccggttctgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttc
gagccgatcctgatcgaaggcaaggcgatccagcttcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggccgtgcacgtgcccctgagcctcgaggcgcag
ctggaagcgcgcgtcctgatgatgtccacgaacaacgtgctgtcgcccgccaacggcgcg
ccgatcatcgtgccgtcgcaggacatggtgctgggtctctactacaccaccatgatgcgc
gaggggatgaagggcgaaggcatggccttcggctcggtcgatgaggtcgagcacgcgctc
gccgccggcgaggtgcacctgcacgccaagatcaccgcgcgcatcccgcagatcgacgag
gacggcaacgaggtcatccgccgcgtcgagacgacgccgggccgcctgcggctcggggcg
ctcttgcccaagaacgccaaggcgccgttcgagctggtcaaccgcctgctgcgcaagaag
gacgtccagaacgtcatcgacaccgtctaccgctactgcggccagaaggaatcggtgatc
ttctgcgaccagatcatgggcatgggcttccgcgaggcgttccgcgccggcatctcgttc
ggcaaggacgacatggtggtgccggacaacaagtggaccatcgtcgaggaagtccaggac
caggtgaaggagttcgagcagcagtacctcgacggcctcatcacccagggcgagaagtac
aacaaggtcgtggacgcctggtcgaagtgcaacgaccgcgtgaccgaagccatgatggcc
accatctcgtccagcaagcgcgacgagaacggggccgaggccgagccgaactcggtctac
atgatggcccactcgggcgcccggggttcggtcagccagatgaagcagctcggcgggatg
cgcggcctgatggccaagccgtcgggcgagatcatcgagacgccgatcatctcgaacttc
aaggaaggcctgaccgtgctcgagtacttcaactcgactcacggtgcccggaagggtctg
tcggacaccgcgctcaagacggcgaactcgggttacctgacccggcgtctggtggacgtg
gcgcaggactgcatcatccgtgagcatgactgcggcaccgaccgggcgatcaccgcctcg
gcggcggtcaacgatggcgaggtcatcgcgccgctttccgagcgggtgctgggtcgcgtc
gcggccgaggacgtgctcgtccccggctcgggcgaggtgctggtgcgccacaacgagctg
atcgacgaacgcaaggccgacgccatcgaggcggcgggcgtgcagaccgtgcgcatccgc
tcggcgctgacctgcgaggccgaggacggcgtctgcgcgctgtgctacgggcgcgacctc
gcccgcggcacgctggtcaacatcggcgaggcggtgggcatcatcgccgcgcagtcgatc
ggtgagccgggcacccagctgacgatgcggaccttccacatcggcggcatcgcccagggt
ggccagcagtcgttcatcgccgccaaccaggacggcacggtgaagttcgagaacgaggcg
gtgctcgagaatgcctcgggcgagctgatcgtgatgagccgctcgatgcagctgcacgtc
atgaacgaccagggcacggcgctggcgacgcacaagctgttctacggctcgaagctcatg
gtccgcgacggcgacaaggtgacgcgcggccagaagatgttcgaatgggacccctacacc
ctgccgatcatcgccgagcaggcgggcgtggcgcggttcgtcgaccttctctcgggcctc
tcggtccgcgacgagaccgacgatgcgaccggcatgacccagaagatcgtgacggactgg
cggtcggcgccgaaaggcaacgacctcaagcccgagatcatcatcatgggcgaggacggc
gagccggtccgcaacgatcagggcaacccgatcagctatccgatgtcggtggacgcgatc
ctctcgatcgaggacgggcaagaggtcaaggccggcgacgtggtggcccggatcccgcgc
gaaggcgcgcggaccaaggacatcaccggtggtctgccgcgggtggccgaactcttcgag
gcgcgtcgtcccaaggaccacgcgatcatcgccgagatcgacggcacggtgaaattcggc
aaggactacaagaacaagcgccggatcatcgtgcagcccacgaacgaggatctcgagccg
gtcgagtacatggtgccgaaaggcaagcacatcccggtgcaggaaggcgacttcgtgcag
aagggtgactacatcatggacggcaacccggcgccgcacgacatcctgcggatcatgggg
atcgaggccttggccgactatctcatcgacgaggtgcaggacgtctatcgactgcagggc
gtgaagatcaacgacaagcacatcgaggtgatcgtccgccagatgctgcagaagatcgag
atcctcgactctggcgacaccacgctgctcaagggcgagcacgtggaccgcgacgagttc
gacgaggagaacgccaagatcgaggcgcgcggcggccgtccggcgaccggggaaccggtg
ctgctggggatcaccaaggcgagcttgcagacccgcagcttcatctcggccgcgtcgttc
caggaaacgacccgggtgctgaccgaggccgcggtgcagggcaagcgcgacaagctcgtc
gggctgaaggagaacgtcatcgtcggccggctgatcccggccggcaccggcggggccacc
gcgcggatcaagcgcatcgccgaggaccgcgacaacgaggtcatcgagatgcgccgcgcc
gaggccgaagccgtggcggcgctggccgccgaggtgacgccgatcgagcacgcggaagag
atcatcacctcgcccgaggaatga
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integrated database retrieval system
