Paracoccus sanguinis: HGN31_09970
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Entry
HGN31_09970 CDS
T07521
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psan
Paracoccus sanguinis
Brite
KEGG Orthology (KO) [BR:
psan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psan03032
]
HGN31_09970
03400 DNA repair and recombination proteins [BR:
psan03400
]
HGN31_09970
Enzymes [BR:
psan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGN31_09970
DNA replication proteins [BR:
psan03032
]
Prokaryotic type
DNA Topoisomerases
HGN31_09970
DNA repair and recombination proteins [BR:
psan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGN31_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QJD18292
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All DBs
Position
2089233..2090297
Genome browser
AA seq
354 aa
AA seq
DB search
MALDDSGTIVDPQDAAESVGLRYVSDGDPGITRRKAGKGFSYRGLDGRPIRDKAELARIR
SLAIPPAYADVWICADPEGHIQATGRDAKGRKQYRYHPRFREVRDSAKYDRMLAFARVLP
GLRARVDADMARRGMGREKVLATVVHLLEATMIRVGNADYVKQNKSHGLTTLRDRHVKVE
GTEVRFRFKGKSGKTWDLGLRDRRVARIVRQSQELPGQHLFQYLDDTGAQREVTSGDVNA
YLREITGEGITAKDFRTWTGTVLAALALAEYEAADSAAAAKRNVREAIEQVAARLGNTPT
ICRKCYVHPTVIDSYLDADLKLEIREEIAEELDEGGLRPEEVRVLDFLEARLAS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atcgccttggacgacagcggcaccatcgtcgatccgcaggatgcagccgaaagcgtcggg
ctgcgctacgtctcggacggcgatcctgggatcacccggcgcaaggcgggcaaggggttc
agctaccgcggcctcgacggccggccgatccgcgacaaggccgagctggcgcggatcagg
tcgctggccattccgcccgcctatgccgatgtctggatctgcgccgaccccgaggggcac
atccaggccaccgggcgcgatgccaaggggcgcaagcaataccgctatcacccccgcttc
cgcgaggtccgcgacagcgccaagtatgaccggatgctggcctttgcccgcgtgctgccg
gggctcagggcgcgggtggacgccgacatggcccgccgcgggatggggcgcgagaaggtg
ctggcgaccgtcgtccatctgctcgaggcgacgatgatccgggtgggcaacgccgactat
gtgaagcagaacaagtcgcacgggctgaccacgctgcgcgaccgccacgtcaaggtcgag
gggaccgaggtgcggttccgcttcaagggcaagtcgggcaagacctgggatctcggcctg
cgcgaccggcgcgtggcgcggatcgtgcggcagagccaggagctgccgggccagcacctg
ttccagtatctcgacgacacgggcgcgcagcgcgaggtgacctcgggcgacgtcaacgcc
tacctgcgcgagatcaccggcgaggggatcaccgccaaggacttccgcacctggaccggg
acggtgctcgccgcgctggcgctggccgagtacgaggccgccgacagcgccgccgccgcc
aagcggaatgtccgcgaggcgatcgagcaggtggccgcccggctgggcaacacccccacc
atctgccgcaagtgctatgtccatccgacagtgatcgacagctacctggacgccgacctg
aagctcgagatccgcgaggagatcgcggaggagctggacgagggcgggctgcgccccgag
gaggtgcgggtgctcgacttcctcgaagcgcggctggcgtcatga
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