Pseudomonas sp. AN-1: SK095_00760
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Entry
SK095_00760 CDS
T11500
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psao Pseudomonas sp. AN-1
Pathway
psao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SK095_00760 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psao03400
]
SK095_00760 (uvrB)
DNA repair and recombination proteins [BR:
psao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SK095_00760 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK095_00760 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPP45963
LinkDB
All DBs
Position
173894..175909
Genome browser
AA seq
671 aa
AA seq
DB search
MSRFKLVTRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIARVQRPTL
VLAPNKTLAAQLYGEFRSFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPESYLKMVLHVDRGDRLDQRELLRRLAELQY
TRNDMDFARATFRVRGDVIDIYPAESELEAIRIELFDDEVESLAAFDPLTGEVIRKLPRF
TFYPKSHYVTPREALLEAVDNIKVELRQRLEYLRAHDKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEAPPTLYDYLPDNALLVIDESHVTVPQIGAMYKGDRSRKETL
VEYGFRLPSALDNRPMKFEEWEAASPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPQ
LEVRPATTQVDDLLSEIRKCVAAGERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRTGAFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADQVTGSMQRAIDETERRRAKQIAFNEKHGIVPQGVKKDVQDILEGAVV
PGARSRKRSAAARAAEESARYEAALNSPSEITKRIRQLEEKMYELARDLEFEAAAQLRDE
IQKLRERLLAL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggttcaagcttgtcacccgcttcaaacccgccggcgaccagccggaggcgatc
cgccagatggtcgagggcctcgaggccgggctgtcgcaccagaccctgctcggcgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgccagggtgcagcggccgacgctg
gtcctcgcccccaacaagaccctggccgcgcagctgtacggcgagttcaggagcttcttc
cccgacaacgcggtggagtacttcgtctcctactacgactactaccagccggaagcctac
gtaccgtcctccgacacctacatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggccggacgcgatcatcgtcgccacc
gtgtcgtcgatctacggcctcggcgatcccgagtcgtacctgaagatggtcctgcacgtc
gaccgcggcgaccggctcgaccagcgcgagctgctgcgccgcctcgccgagctgcagtac
acccgcaacgacatggacttcgcccgcgccaccttccgcgtgcgcggcgacgtgatcgac
atctacccggccgaatcggagctggaggcgatccgcatcgagctgttcgacgacgaggtg
gaaagcctggccgccttcgatccgctgaccggcgaggtgatccgcaagctgccgcgcttc
accttctatcccaagagccactatgtgaccccgcgtgaggcgctgctggaggcggtggat
aacatcaaggtcgaactcaggcagcgcctggagtacctgcgcgcgcacgacaagctggtc
gaggcgcagcgcctggagcagcgcacccgcttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgagaactactcgcgctacctgtccggccgcgcgccgggcgaggcg
ccgccaaccctgtacgactacctgccggacaacgccctgctggtgatcgacgagtcgcac
gtcaccgtgccgcagatcggcgccatgtacaagggcgaccgttcgcgcaaggaaaccctg
gtggagtacggcttccgcctgccctcggcgctggacaaccggccgatgaagttcgaggag
tgggaggcggccagtccgcagaccatcttcgtctccgccacccccggcccctacgaggcc
gagcacgccggaagggtgatcgagcaggtggtgcgcccgaccgggctggtcgacccgcag
ctggaagtgcgcccggccaccacccaggtcgacgacctgctctcggagatccgcaagtgc
gtggccgccggcgagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgactacctgggcgaccacgacgtcagggtgcgctacctgcactcggacatcgacacc
gtcgagcgcgtggagatcatccgcgacctgcgcaccggtgccttcgacgtgctggtcggc
atcaacctgctgcgcgagggcctggacatgcccgaggtggcgctggtggcgatcctcgac
gccgacaaggaaggcttcctgcgcagcgaacgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggtcgggcgatcctctacgccgaccaggtgaccggctcgatgcag
cgcgccatcgacgagaccgagcggcgccgtgccaagcagatcgccttcaacgagaagcac
ggcatcgtgccgcagggcgtgaagaaggacgtgcaggacattctcgagggcgccgtggtg
cccggcgcgcgcagccgcaagcgcagcgcggcggccagggcggcggaggagagcgcccgc
tacgaggcggcgctcaactcgccgagcgagatcaccaagcgcatccgccagttggaggag
aagatgtacgagctggcccgcgacctcgagttcgaggccgccgcgcagctgcgcgacgag
atccagaagctgcgcgagcggttgctggcgctgtag
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integrated database retrieval system
