Pseudomonas sp. AN-1: SK095_07390
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Entry
SK095_07390 CDS
T11500
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psao Pseudomonas sp. AN-1
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psao03400
]
SK095_07390
DNA repair and recombination proteins [BR:
psao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SK095_07390
Archaeal homologous recombinant proteins
SK095_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
AAA_15
RsgA_GTPase
AAA_22
DUF2730
cobW
Motif
Other DBs
NCBI-ProteinID:
WPP47197
LinkDB
All DBs
Position
1592805..1596440
Genome browser
AA seq
1211 aa
AA seq
DB search
MKILAIRLKNLASLAGEQEVDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGETPR
LQHARAALKVPDGSDNEALGSDDGRNLLRRGASGGYAEVDFVGVDGKRYRARWEVRRARD
KATGKLQNSQQSLRDLDGDQLLATSKREFAEQMEQRLGLNLQQFTRAVLLAQSEFSAFLK
ADDNQRGELLEKLTDTGVYSRIGKAAYAAAKRAREALEELERQAGGIRPLADEERRTLEQ
QHAEAVAQFKAEQATLQSLEQQRQWLVERDRLQGEQQAAQEQLDAALADQASLAGERQTL
ALLEQLAPERHRFARQAKQGPLLAGLEIDLQRHGEQQQALQQRLGELEAAARQSAAAQEA
AEQARQQAEAPLRQAYAEQQRLAELQQELTRAQQAEQQARDAWRAGETALAGLQERQTRL
SGQQAALAERLQRSSALHALGNAWDGHRPRLQQAVQLANQLAKGREELPGLQQAARLAQE
QLTDARQQLDALQRQLGGNPAAEQLAALQCQLGEWRPRLSALEEAQRLWQRRAELASGLA
KTQARAAELQARREQCVTSGKTTTAELQSAEEALKLTVKLLERQRLARSASVEELRAQLR
DGEPCPVCGSAEHPYHHGDALLAALASQDEAEEQRARQQVERLRERQTELRTEYRELERQ
QGEAAQEQQRLAGELGTLDGDLATHAELLAQPEERRGDWLAAQLADLHQSIRQTEQRQDE
LLKLQQRSEQLQRQHLAAEQASQTASRNLDHQNQRLGEDQQRLDAELQAFATLLPGDWLQ
RWQSEPARSFMALDRQVAERLQQLDEQRELEAEYRERQTVLDKERNDQSHRQQALQACSA
RLGELEQLRHAAEASLRQCLGEQPSAAAWQRQLEQAESRARAAANAGSEALQQARQQQIR
LNSEGDNLRQRLQALQAEQAELQRELGVWRAGHPQLDDATLAALLARPAGDLAQLREQLK
AAEDAVTQGRVRLDERSQQLATHLAKVSEAPEPAMLEQALGEQRQRCEQAEQQATDLRAS
LVEDDRRCQQSRELLTRIAAAQAEHLRWGRISALIGSADGATFRKIAQAYNLDLLVQHAN
LQLRQLARRYRLQRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMASS
KLRIESLFIDEGFGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPVQIRVQRQ
GNGASALSIVG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaagaacctcgcctcgctggccggcgagcaggaagtc
gacttcaccgccgaaccgctggccagcgccggcctgttcgccatcaccggaccgaccggt
gccggcaagagcaccctgctcgacgcgctgtgcctggcgctgttcggcgagacgccgcgc
ctgcagcacgccagagccgccctcaaggtgccggacggcagcgacaacgaggccctcggc
agcgacgacggccgcaacctgctgcgccgcggcgccagcggcggttatgccgaagtggac
ttcgtcggcgtcgacggcaagcgctaccgggcgcgctgggaagtgcgccgcgcccgcgac
aaggcgaccggcaaactgcagaacagccagcagagcctgcgcgacctggacggcgaccag
ctgctggccaccagcaagcgcgagttcgccgagcagatggagcagcgcctgggcctcaac
ctgcagcagttcacccgcgccgtgctgctggcgcagagcgagttcagcgccttcctcaag
gccgacgacaaccagcgcggcgaactgctggagaagctcaccgacaccggcgtgtacagc
cgcatcggcaaggcggcctacgccgcggccaagcgcgcccgcgaagcgctggaggaattg
gagcgccaggccggcggcatccgcccgctggccgatgaggagcgccggacgctggaacag
cagcacgccgaggccgtcgcccaattcaaggccgagcaggccaccctgcagagcctggag
cagcagcgccagtggctggtcgagcgtgaccgcctgcagggcgagcagcaggcggcgcag
gagcagctggacgccgccctcgccgatcaggcaagcctggccggcgaacgccagaccctc
gccctgctcgaacagctcgcccccgagcgccaccgcttcgcccgtcaggccaagcagggg
ccgctgctggccggactggaaatcgacctgcagcgccatggcgagcagcagcaggcgctg
caacagcgcctgggcgaactggaagcggccgcccgacagagcgccgccgcgcaggaggcc
gccgagcaagcccgccagcaggccgaggcgccgctgcgccaggcctatgccgagcaacag
cgcctggccgaactgcagcaggagctgacccgggcgcagcaggccgagcagcaggcgcgc
gacgcctggcgcgccggggaaaccgcgctggccgggctgcaggagcgccagacccgcctg
agcggccagcaggccgcactggccgagcgcctgcagcgcagcagcgccctgcacgcgctg
ggcaacgcctgggacggccaccgcccgcgcctgcagcaggccgtgcaactggccaaccag
ttggccaagggccgcgaggaactaccggggctgcaacaggcagctcgcctcgcgcaggag
cagctgacagacgcacgccagcagctcgacgccctgcagcggcaactcggcggcaacccg
gcggcggaacaactggccgcgctgcaatgccagctcggcgagtggcgcccgcgcctgagc
gccctggaagaagcgcaacggctctggcagcggcgtgcggagctggccagcgggctggcc
aagacccaggcgcgcgccgccgaactgcaggcccgccgcgaacagtgcgtgaccagcggc
aagacgaccaccgccgaactgcagagcgcagaagaggcgctcaagctaaccgtcaagctg
ctggaacggcagcgcctggcgcgcagcgccagcgtcgaggagttgcgcgcccagctgcgc
gacggcgaaccctgcccggtatgcggcagcgccgagcatccgtatcaccacggcgatgct
ctgctcgctgccctcgccagccaggacgaagccgaagaacagcgcgcccgccaacaggtc
gagcggctcagggagcgtcagaccgaactgcgcaccgagtatcgcgagctggaacgccag
cagggcgaagcagcccaggagcagcaacggctcgccggcgaactgggcacgctggacggc
gacctcgccactcacgctgaactgctcgctcaaccagaggaacggcgcggcgactggctg
gccgcgcaactggccgacctgcaccagtccatccgccaaaccgagcagcgccaggatgaa
ctgctcaagcttcagcagcgcagcgagcagctacagcgccagcatctggctgccgagcag
gccagccagaccgccagccgcaatctggaccaccagaaccagcggctgggcgaagaccag
cagcgcctggacgccgagctgcaggccttcgccaccctgctgcccggcgactggctgcaa
cgctggcagagcgaaccggcgcgcagcttcatggcgctggaccgccaggtggccgagcgc
ctgcagcagctggacgagcagcgcgagctggaggcggaataccgcgagcggcagaccgtt
ctggacaaggaacgcaacgaccagtcccatcgccagcaggccctacaggcctgcagcgcc
cgcctgggcgagctggagcaactgcgtcacgcggccgaagccagcctgcgccagtgcctc
ggcgagcagcccagcgccgccgcctggcaacgccagctggagcaggcggaaagccgggct
cgcgctgccgccaacgctggcagcgaggcgctgcagcaggcccgccagcagcagatccgc
ttgaacagcgagggcgacaacctgcgccagcgcctgcaggcgttgcaggccgagcaggcc
gaactgcagcgggaactgggcgtctggcgtgccggccacccgcagctggacgacgccacc
ctcgccgccctgctcgcccgcccggccggcgatctcgcccagctgcgcgagcagctcaag
gccgccgaggacgccgtgacccagggccgggtacgcctggacgagcgcagccagcagctg
gccacgcacctggccaaggtgagcgaagcgcccgagccggctatgctggagcaggcgctg
ggcgaacagcgtcagcgctgcgagcaggccgaacagcaggccaccgacctgcgtgcctcg
ctggtcgaggacgaccgccgctgccagcagagccgcgagctgctgacacgcatcgccgcc
gcacaggccgaacacctgcgctgggggcggatcagcgcgctgatcggctcggccgacggc
gccaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcagcacgccaac
ctgcaactgcgccagctggcccggcgttaccgcctgcagcgcggcggcagtgcgctgggc
ctcttggtgctggataccgaaatgggcgacgagctgcgctcggtgcattcgctgtccggc
ggcgagaccttcctggtgtcgctggccctggcgttgggcctggcgtcgatggcgtcgagc
aagctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgaccccgagtcg
ctgcagctggccatggacgcgctggacaacctgcaggcccagggccgcaaggtggcggtg
atctcccacgttcaggagatgcacgagcgcatcccggtgcagatccgcgtgcagcgccag
ggcaacggggccagtgcgttgagcatcgtcggctga
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integrated database retrieval system
