Pseudomonas sp. AN-1: SK095_07535
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Entry
SK095_07535 CDS
T11500
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psao Pseudomonas sp. AN-1
Pathway
psao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SK095_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psao03019
]
SK095_07535
03400 DNA repair and recombination proteins [BR:
psao03400
]
SK095_07535
Enzymes [BR:
psao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SK095_07535
Messenger RNA biogenesis [BR:
psao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SK095_07535
DNA repair and recombination proteins [BR:
psao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK095_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPP47224
LinkDB
All DBs
Position
1629984..1635125
Genome browser
AA seq
1713 aa
AA seq
DB search
MAVPAQPKCLVFDLEVVPATADQPARIIKLGALRPDTGAELEFDTPSPQRLDAALRQLDQ
LAEGASFLLGHNLLGHDLPLLEAAAPGLALLRLPAIDTLRLSPLAFPQNPYHRLIKDYKL
IRASLNSPLADCRATLALFLDQQQAFRQLHASRNEELLCYQALVAPQVGAGLGNFFMHMS
GQRPLPVERLGELLPTLLRESNPTLSRDLKVCRTRLASLIAHDLHQAERHWPLAYTLAWL
RVAGGNSVLAPWVRHQFPAVAQLIGELRDQPCSDPACQYCRSAHDPRHELRRYFGFDDFR
REAGGASAQEDIVLAGMQGRSVLAVLATGGGKSLCYQLPALNRYHRNGSLTVIVSPLQSL
MKDQVDGLLARNVQCAAALNGLLTLPERADVLEKLQLGDVGLLLVSPEQFRNKALRSALA
QRQIGAWIFDEAHCLSKWGNDFRPDYLYVARFIREFSGDAPLAPVGCFTATAKLDVLEDI
RSHFRDALGIEFREFIGTPERSNLSFEVQPVGPGEKWPRTHQLLEDELAGRDGGAVVFVS
SRKNAEGLAEFLQRQDWACRHFHAGLQPHEKKDIQDAFKDGRLRVIVATNAFGMGVDKQD
VRLVVHADIPGSLENYLQEAGRAGRDQQQARCVLLYDPQDIETQFGLSERSQLSQRDIQQ
ILRKLRDESKRRKGGQLVISAGEILQGVQTSFDADDRDAETKVVTAIAWLERGRFLRREE
NHTRVFPARLSLPEDEAEARLKQARLPARRLEEFRAILQYLYAAEADERVNTDRLMTLTG
QTAEEVAGSLRQLEELGLLENDTQLTLYLRHAMADASAERLRQSLQLEQALLETLAELAP
DAGEGDWQDLHLPALTAQLRETATLPGLLPLHILRLLHSLAQDRDGDRQQGSCLELRQLN
RDYLKLRLRNGYGWRQVAELGEKRRAIAAVLLPFLLGKLPAGARGKDLLVTTTFGELRGL
LEADLELGPRIRPEQRQAALEHVLLYLHQQEVLTLNHGMTVMRRAMTIAIDPERDRQNYL
KEDFQRLDEHYRERRIQVHVMREYAEIALREMAAALNLVLHYFSDSKQAFLRRYFAGRDK
VLALATSEASWRAITGPLDATQRDIVTDGERNRLILAGPGSGKTRVIVHRIAYLLRVRRV
PASAIIALTFNRHAANEIRRRMLELVGQEAFGLTVLTYHAMAMRLTGTSFTRRDKVDERE
LEALLERAAELLEGRQLVEGEEDDLRERLLRGYRYILVDEYQDIDERQYRLVSALAQARR
RSEDGDADLCILAVGDDDQNIYQWRGGSNRYIERYREQYAAEISYLVENYRSSQAIIAAA
NRLIEGNPGRLKAAQPIRIDRQRQAEPHGGRWQALDAQRQGRVLLLQLPASDREHGNLQA
QALLGELQRLLDLEQCSDWQGCAVLARTRRYLQPLQAWCEQRGVAYHLADDQDSLPLTRQ
RGFVHAIERLRAGDALPDVAGLRASLTEWAAGAEWRTFFATALEQLQGELGDCRLSRAAL
IDWLYDYARELRQQARPGLYLGTVHSAKGLEFRHVALLDGGWQQRPEQLEEERRLYYVGM
TRARETLTLAAFQPGNPLSRALAGEVQERDFAGRHDPQLATRYRTLGLQEIDLGFAGRHP
AQAPIHQAIAELQPGDPLQLRADGERHLLLDGRGRCIGRTSLAFRHGLEIEHCEVAGILT
RYAEDGEEQFRDGLRCVQWEIVVPRLRGRERGA
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctgcgcaaccgaagtgtctggtattcgatctggaggtggtgccggcaact
gccgaccagccggcgcggatcatcaagctcggcgccctgcgtccggacaccggcgcggag
ctggagttcgacaccccgtcaccccagcgcctcgacgccgcgctcaggcagctggaccaa
ctggccgaaggcgccagcttcctgctcggccacaacctgctgggccatgacctgccgctg
ctcgaggcggccgctcccggcctcgccctgctgcgcctgccggccatcgacaccctgcgc
ctgtcgccgctggccttcccgcagaatccgtaccaccggctgatcaaggactacaagctg
atccgcgccagcctcaactcgccgctggccgactgccgggcgaccctggcgctgttcctc
gaccagcagcaggcgttccgccagctgcacgcgagccgcaacgaggagctgctctgctac
caggcgctggtcgcgccgcaggtcggcgccggtctcggcaatttcttcatgcacatgagc
ggccagcggccgctgccggtcgagcgcctcggcgaactgctgccgacgctgctgcgggaa
agcaatcccaccctgtcccgcgatctcaaggtctgccgcacccgtctggccagcctgatt
gcccatgacctgcaccaggcagagcggcactggccgctggcctacaccctcgcctggcta
cgggtggccggcggcaactcggtgctggcaccctgggtgcgccaccagttcccggcggtg
gcccagctgatcggcgagctgcgcgaccagccgtgcagcgatcccgcctgccagtactgc
cgcagcgcccatgacccgcgccacgagctcaggcgctacttcggcttcgacgacttccgc
cgcgaggcgggcggcgccagcgcgcaggaggacatcgtgctggccggcatgcagggccgc
tcggtgctcgcggtgctcgccaccggcggcggcaagtcgctgtgctaccagctgccggcg
ctcaaccgctaccaccgcaacggcagcttgacggtgatcgtctcgccgctgcagtcgctg
atgaaggaccaggtcgacggcctgctggcgcgcaacgtgcagtgcgccgccgcgctcaac
ggcctgctgaccctgcccgagcgcgccgacgtgctggagaagctccagctcggcgacgtc
ggcctgctgctggtgtcgcccgagcagttccgcaacaaggcgctgcgcagcgccctcgcc
cagcgccagatcggcgcgtggatcttcgacgaggcgcactgcctgtcgaagtggggcaac
gacttccgccccgactacctgtacgtcgcgcgcttcatccgcgaattcagcggcgacgcg
ccgctggcgccggtcggctgcttcaccgccaccgccaagctcgacgtgctggaggacatc
cgcagccacttccgcgacgcgctgggcatcgagttccgcgagttcatcggcacgcccgag
cgcagcaacctgagcttcgaggtgcagccggtcggtcccggcgagaagtggccgcgcacc
caccagctgctcgaggacgagctggccggtcgcgacggcggcgccgtggtgttcgtctcc
agccgcaagaacgccgaggggctggccgaattcctgcagcgccaggactgggcctgccgc
cacttccacgccgggctgcagccccacgagaagaaggacatccaggacgcgttcaaggac
ggccggctgcgggtgatcgtcgccaccaacgccttcggcatgggcgtggacaagcaagac
gtgcgcctggtggtgcacgccgacatccccggctcgctggagaactacctgcaggaggcc
ggccgcgccgggcgcgaccagcagcaggcgcgctgcgtgctgctctacgacccgcaggac
atcgagacccagttcggcctcagcgagcgctcgcagctcagccagcgcgacatccagcag
atcctcaggaagctgcgcgacgagagcaagcggcgcaagggcggccaactggtgatcagc
gccggcgagatcctccagggcgtgcagaccagcttcgacgccgacgaccgcgacgcggag
accaaggtggtcaccgccatcgcctggctggagcgcggccgcttcctgcgccgcgaggag
aaccacacgcgggtgttcccggcgcgcctgagcctgccggaagacgaagccgaggcgcgc
ctgaagcaggcccgcctgccggcccgccgtctggaggagttccgcgccatcctgcagtac
ctctacgccgcggaggccgacgagcgcgtcaacaccgaccggctgatgacgctcaccggg
cagaccgccgaggaagtcgccggcagcctgcgccagctggaggagctgggcctgctggag
aacgacacccagctgaccctctacctgcgccacgccatggccgacgcctcggccgagcgc
ctgcgccagtcgctgcagctggaacaggccctgctggaaaccctggccgaactggcgccg
gacgccggcgagggcgactggcaggacctgcacctgcccgcgctgaccgcccagctgcgc
gagaccgccaccctgcccgggctgttgccgctgcacatcctgcgcctgctgcacagcctg
gcccaggaccgcgacggcgaccgccagcagggcagctgcctggagctgcgccagctcaac
cgcgactacctcaagctgcgcctgcgcaatggctacggctggcgccaggtggccgaactg
ggcgagaagcgccgcgccatcgccgctgtgctgctgcccttcctgctcggcaagctgccg
gccggtgcgcgcggcaaggacctgctggtgaccaccaccttcggcgaactgcgcgggctg
ctcgaggccgacctggagctcggcccgcgcatccggccggagcagcgccaggccgccctc
gagcacgtgctgctgtacctgcaccagcaggaggtgcttaccctcaaccacgggatgacc
gtgatgcgccgggcgatgaccatcgccatcgaccccgagcgcgacaggcagaactacctc
aaggaggacttccagcgcctcgacgagcactaccgcgagcggcgcatccaggtgcacgtg
atgcgcgagtacgcggagatcgccctgcgcgagatggccgcggcgctcaatctggtgctg
cactacttcagcgacagcaagcaggcgttcctgcgccgctacttcgccggcagggacaag
gtgctggcgctggccaccagcgaggcctcctggcgggcgatcaccgggccgctcgacgcc
acccagcgcgacatcgtcaccgacggcgagcgcaaccggctgatcctcgccggccccggc
tcgggcaagacgcgggtgatcgtccatcgcatcgcctacctgctgcgcgtgcgccgggtg
ccggccagcgccatcatcgcgctgaccttcaaccgccacgccgccaacgagatccgccgg
cgcatgctcgaactggtcggccaggaggccttcggcctcaccgtgctgacctaccacgcc
atggccatgcgcctgaccggcaccagcttcacccgccgcgacaaggtcgacgagcgcgaa
ctggaagccctgctggagcgcgccgccgaactgctcgagggccgccagttggtggagggc
gaggaggacgacctgcgcgagcgcctgctgcgcggctaccgctacatcctggtcgacgaa
taccaggacatcgacgagcgccagtaccgcctggtcagcgccctggcccaggccaggcgg
cgcagcgaggatggcgacgccgacctgtgcatcctcgccgtcggcgacgacgaccagaac
atctaccagtggcgcggtggcagcaaccgctacatcgagcgctaccgcgaacagtacgcc
gccgagatcagctacctggtggagaactaccgctccagccaggcgatcatcgccgccgcc
aaccggctgatcgaaggcaatccggggcggctcaaggccgcgcagccgatccgcatcgac
cggcagcgccaggccgagccgcacggcggccgctggcaggcgctggatgcgcagcgccag
ggccgcgtgctgctcctgcagctgccggcgagcgaccgcgagcacggcaacctgcaggcc
caggcgctgctcggcgagctgcagcgcctgctcgatctggagcagtgcagcgactggcag
ggctgcgccgtgctcgcccgcacccgccgctacttgcagccactgcaggcctggtgcgag
cagcggggcgtcgcctaccacctcgccgacgaccaggacagcctgccgctgacccgccag
cgcggcttcgtccacgccatcgagcggctacgcgcgggcgatgcgctgccggacgtcgcc
gggctgcgcgcaagcctcaccgagtgggcggccggggccgagtggcggacgttcttcgcc
accgccctggagcagctgcagggcgaactgggcgactgccggctgtcgcgcgcggcgctg
atcgactggctgtacgactacgcccgcgaactgcgccagcaggcgcgccccggcctgtat
ctgggcaccgtgcattcggccaagggcctggagttccgccacgtggcgctgctcgacggc
ggctggcagcagcgcccggagcaactggaggaggagcgtcggctgtactacgtgggcatg
acccgggcgcgggaaaccctgaccctggccgccttccagcccggcaacccgttgtcccgc
gccctcgccggcgaggtgcaggaacgggacttcgccggccgccacgacccgcagctggcg
acccgctaccgcacgctcggcctgcaggagatcgacctcggcttcgccggccgccacccc
gcgcaggcgcccatccaccaagccatcgccgagttgcagcccggcgacccgctgcagctg
cgcgcggacggcgagcgtcatctgctgctcgacggccggggccgctgcatcggccgcacc
tcgctcgccttccgccacggcctggagatcgagcactgcgaggtggccggcattctcacc
cgctacgccgaggacggcgaggaacagttccgcgacggcctccggtgcgtgcagtgggag
atcgtggtgccgcgcctgcgcgggcgggagcgcggcgcctga
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