Pseudomonas sp. AN-1: SK095_10525
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Entry
SK095_10525 CDS
T11500
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psao Pseudomonas sp. AN-1
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psao03009
]
SK095_10525
Enzymes [BR:
psao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SK095_10525
Ribosome biogenesis [BR:
psao03009
]
Prokaryotic type
rRNA helicases
SK095_10525
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
Sf6_terminase
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WPP47759
LinkDB
All DBs
Position
complement(2249155..2250489)
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AA seq
444 aa
AA seq
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MFADYGLHERLLKALSSLSFTEPTAVQAAAIPPALAGRDLRVTAKTGSGKTAAFVLPLLH
HLLQNSKPQAGARALILLPTRELALQTLKEVERFAQFTFIKAGLVTGGEGFKEQAAALRK
NPEIVIGTPGRVLNHLETGSLTLGDVEVLVLDEADRMLDMGLSEDVLKIASACPQERQTL
LFSATAGERALGQVVSAVLRDPEVLLLNRRDELNENLRQQIITADDVPHKERLLQWLLAH
ESFAQAIVFTNTRAQADRLSGVLRASAVRSYVLHGEKTQEERREAVERLRQGNINVLIAT
DVAARGLDIEGIDLVINFDMPRSGDEYVHRIGRAGRVGQAGQAISLICHNDWNLMSSIER
YLRQSFERRQIKELLGSYLGPKKLKASGKAAGSKKKKLAKKSGTAAKGSSSKSPTRKGEK
KSPAPALGDGFVAPRRKKPGAVEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgctgattacggtttgcatgagcgactgctcaaggcgttgtcgtccctgtccttc
accgagccgactgcggttcaggcggcagccatcccgccggccttggcggggcgcgacctg
cgggtgaccgccaagaccggcagcggcaagacggcagcctttgtcctgccgctgctgcac
catctgctccagaacagcaagccgcaggctggcgcgcgcgccctgatcctgctgccgacc
cgcgaactggccctgcagacgctcaaggaggtcgagcgcttcgctcagtttaccttcatc
aaggccggcctggttaccggcggcgaaggcttcaaggaacaggcggccgcgctgcgcaag
aatcccgagatcgtgatcggtaccccggggcgggtactcaaccacctggagaccggcagc
ctgacgctgggcgatgtcgaggtactggtactcgacgaggccgaccgcatgctcgacatg
gggctcagcgaagacgtgctgaagatcgccagtgcctgcccgcaagagcggcagaccctg
ctgttctcggccactgccggtgaacgggcgctggggcaggtggtcagcgcggtactgcgt
gatccggaggtgctgttgctcaatcgtcgggacgagctgaacgaaaacctccgccagcag
atcatcacggccgacgatgtgccgcacaaggagcgcctgctgcagtggctgctggctcac
gagtccttcgcccaggccatcgtcttcaccaatacccgagcccaagccgatcgcctgtcc
ggcgtgctgcgtgcctcggcggtgagatcctacgtgttgcacggcgagaagacccaggag
gagcgccgggaggcggtcgagcgcctgcgtcagggcaacatcaatgtgctgatcgccacc
gacgtggccgcacgtggcctggacatcgaagggatcgacctggtgatcaacttcgacatg
ccgcgtagcggcgacgagtatgtccaccgcatcggtcgcgctggtcgcgtcgggcaggcg
ggccaggcgatctcgctgatctgccacaacgactggaacctgatgtccagtatcgagcgc
tacctcaggcagtccttcgagcgtcgccagatcaaggaactgctgggcagttaccttggg
ccgaagaagctcaaggcatccggcaaggcggcgggcagcaagaagaaaaagctggccaag
aagtctgggactgcggccaagggcagcagcagcaagtcgccgacccgcaagggcgagaag
aaaagcccggccccggctctcggtgatggtttcgtggcccccaggcgcaagaagccgggg
gcagtcgagggctga
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