Pseudomonas sp. AN-1: SK095_10605
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Entry
SK095_10605 CDS
T11500
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psao Pseudomonas sp. AN-1
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psao03021
]
SK095_10605 (rapA)
Transcription machinery [BR:
psao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SK095_10605 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WPP47775
LinkDB
All DBs
Position
2268355..2271204
Genome browser
AA seq
949 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPGD
EITHFEGWKLTVQEVEDVDGLLVYHGINADNESRSLPETQLSNFIQFRLASDRLFAGQID
PLPWFALRYQSLQHASRLQQSALWGLSGARAQPIAHQLHIAREVADRASPRVLLADEVGL
GKTIEAGLILHRQLLSGRARRALILVPENLQHQWLVEMRRRFNLEVALFDAERFLASDAD
NPFEDCQLALVALDWLRDDGRAQQAVRDAGWDLLVVDEAHHLVWHPEGASAEYRLVEDLA
SQIPGVLLLTATPEQLGLESHFARLRLLDPDRFHDLEAFRAESAQYQPVAAAVQELLDHG
KLSQEARAAIHGFLGSEGDALLASVEGGDEEARARLIRELLDRHGTGRVLFRNTRAAVQG
FPERQLHPYPLPSPAEYLELPVDEHADLYPEVGYQAQLDDGGDDSQHWWRFDPRVEWLID
TLKMLKKTKVLVICAHAETALDLEEALRVRSGIPATVFHEGMSILERDRAAAFFADEEFG
AQVLICSEIGSEGRNFQFAHHLALFDLPAHPDLLEQRIGRLDRIGQQHTIQLHVPYLENS
AQERLFHWYHQGLNAFLNTCPTGNALQQQFGARLLPLLEGGDDGEWEQLLAEGRAARESL
EAELHKGRDRLLELNSGGAGEGEALAAEILEQDEDFALPIYMEELFNAFGIDSEDHSENA
LILKPSEKMLDAGFPLGDDEGVTVTYDRNQALAREDMQFLTWEHPMVQGGMDLVLSGTMG
NTSVAIIKNKALKPGTLLLELLYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLAARVS
FEALHDQLESVPRISSNKFVQAQRDVLAKLIAKGEAKVAPQHAERVSEAARRFAAELEEE
VARMEALRAVNPSVRDSELDSLRRQREQGIALFDKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatcaaccggggcaacgctggatcagtgacagcgaggcggaactggggctg
ggaaccatcctcgcgcaggacggccgcctgctcaccgtcctctatccggcgaccggcgat
acccggcagtacgcgctgcgcaacgcgccgctgacccgcgtgcgcttctcgccgggcgac
gagatcacccacttcgagggctggaagctgaccgtgcaggaggtcgaggacgtcgacggc
ctgctggtctaccacggcatcaacgccgacaacgaaagccgctcgctgccggaaacccag
ctgtccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatcgat
ccgctgccctggttcgccctgcgctaccagagcctgcagcacgccagccgcctgcagcag
tcggcgctgtggggcctgtccggcgcgcgcgcccagccgatcgcccaccagctgcacatc
gcccgcgaggtggccgaccgcgccagcccgcgcgtgctgctggccgacgaagtgggtctg
ggcaagaccatcgaggccggcctgatcctgcatcgccagctgctctccggccgcgcccgc
cgcgcgctgatcctggtgccggagaacctgcagcaccagtggctggtggagatgcgccgg
cgcttcaatctggaagtcgccctgttcgacgccgagcgcttcctcgccagcgacgccgac
aatcccttcgaggactgccagttggcgctggtcgccctcgactggctgcgtgacgacggt
cgcgcccagcaggccgtgcgcgacgccggctgggacctgctggtggtcgacgaggcgcac
cacctggtctggcacccggaaggcgccagcgccgaataccgcctggtcgaggacctggcc
agccagatccccggcgtgctgctgctcaccgccacccccgagcagctcggcctggaaagc
cacttcgcccgcctgcgcctgctcgacccggaccgcttccacgacctcgaggcgttccgc
gccgagagcgcccagtaccagccggtggctgccgcggtgcaggagctgctcgaccacggc
aagctgtcccaggaggcgcgcgccgccatccacggcttcctcggcagcgagggcgatgcc
ctgctggccagtgtcgagggcggcgacgaggaagcccgcgcgcggctgatccgcgagctg
ctcgaccgtcacggcaccggccgcgtgctgttccgtaacacccgcgccgcagtgcagggc
ttccccgagcgccagctgcatccctacccgctgccgagcccggccgagtacctggagctg
ccggtcgacgagcacgccgacctctatccggaagtcggctaccaggcgcagctggacgac
ggcggcgacgacagccagcactggtggcgcttcgatccgcgcgtcgagtggctgatcgac
accctgaagatgctgaagaagaccaaggtgctggtgatctgcgcccacgccgagaccgcc
ctcgatctcgaggaagccctgcgcgtgcgctccggcatcccggccacggtattccacgag
ggcatgagcatcctcgagcgcgaccgcgccgccgccttcttcgccgacgaggagttcggc
gcccaggtgctgatctgctcggagatcggcagcgagggccgcaacttccagttcgcccac
cacctggcgctgttcgacctgccggcccaccccgacctgctcgagcagcgcatcggccgc
ctcgaccgcatcggccagcagcacaccatccagctgcacgtgccctacctggagaacagc
gcccaggagcgcctgttccactggtaccaccagggcctcaacgccttcctcaacacctgc
ccgaccggcaacgccctgcagcagcagttcggcgcgcgcctgctgccgctgctggaaggc
ggcgacgacggcgaatgggagcagttgctggccgaaggccgcgccgcccgcgagagcttg
gaggccgagctgcacaagggccgcgaccgcctgctggagctcaactccggcggcgccggc
gagggcgaggccttggccgccgagatcctcgaacaggacgaggacttcgccctgccgatc
tacatggaggagctgttcaacgccttcggcatcgacagcgaggaccactcggagaacgcg
ctgatcctcaagccgagcgagaagatgctcgacgccggcttcccgctcggcgacgacgag
ggcgtgaccgtcacctacgaccgcaaccaggcgctggcccgcgaggacatgcagttcctc
acctgggagcacccgatggtgcagggcggcatggacctggtgctgtccggcaccatgggc
aacacctcggtggcgatcatcaagaacaaggcgctcaagcccggcaccctgctgctcgag
ctgctctacgtcagcgaggtggtggccccgcgcgccctgcagctcggccgctacctgccg
ccggcggcgctgcgctgcctgctcgacgccaacggcaacgacctggccgcgcgggtcagc
ttcgaggccctgcacgaccagctggaaagcgtgccgcggatcagctccaacaagttcgtc
caggcccagcgcgacgtgctggccaagctgatcgccaagggcgaggccaaggtcgccccg
cagcacgccgagcgggtcagcgaggccgcccgccgcttcgccgccgagctggaggaagag
gtcgcccgcatggaggcgctgcgcgcggtcaaccccagcgtgcgcgacagcgagctggac
agcctgcgccggcagcgcgagcagggcatcgccctgttcgacaaggccgccctgcgcctg
gaggcgatccgcgtgctggtcgccggctaa
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