Pseudomonas sp. AN-1: SK095_11905
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Entry
SK095_11905 CDS
T11500
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psao Pseudomonas sp. AN-1
Pathway
psao03030
DNA replication
psao03430
Mismatch repair
psao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SK095_11905 (holA)
03430 Mismatch repair
SK095_11905 (holA)
03440 Homologous recombination
SK095_11905 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psao03032
]
SK095_11905 (holA)
03400 DNA repair and recombination proteins [BR:
psao03400
]
SK095_11905 (holA)
Enzymes [BR:
psao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SK095_11905 (holA)
DNA replication proteins [BR:
psao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SK095_11905 (holA)
DNA repair and recombination proteins [BR:
psao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SK095_11905 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WPP43995
LinkDB
All DBs
Position
2540888..2541925
Genome browser
AA seq
345 aa
AA seq
DB search
MKLNPAQLAKHLQGPLAPVYAVSGDDPLLCQEACDAIRAACRARDFSERQVFHADAGFDW
NLLREAGASLSLFAEKRLLELRLPSGKPGDDGVAVLLDYLARPAEDTVLLLSLPRLDGKT
QKSKWAKALIDGEHCQFVQVWPVDAAQLPQWIRQRLAQAGLSASAEAIDLLVARIEGNLL
AAVQEIEKLKLLVEGNQLDAATVQASVADSARFDLFGLLDAALAGEAAHALRMLEGLRGE
GVEAPVILWGLARELRLLAGLAQQHGQGLPLERLIAQARPPIFGKRQGLVGRAVQRHPAS
RWNQLLRDAQRIDEQIKGQAPGNAWNGLAQLTLAIAGVRLNLPSE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaccccgcccaactggccaagcacctgcagggtccgctcgccccggtctac
gcggtcagcggcgacgacccgctgctgtgccaggaggcctgcgacgccatccgcgccgcc
tgccgcgcccgcgacttcagcgaacgccaggtgttccacgccgacgccggcttcgactgg
aacctgctgcgcgaggccggcgccagcctgtcgctgttcgccgagaaacgcctgctcgag
ctgcgcctgccttccggcaagccgggcgacgacggcgtcgccgtgctgctcgactacctc
gcccgccctgccgaggacaccgtgctgctgctcagcctgcccaggctcgacggcaagacg
cagaagagcaagtgggccaaggcgctgatcgacggcgagcactgccagttcgtgcaggtc
tggccggtggatgccgcgcagctgccgcagtggatccgccagcgcctggcccaggccggc
ctgtcggcgagtgccgaggccatcgacctgctggtggcgcgcatcgaaggcaacctgctg
gccgcggtgcaggagatcgagaagctcaagctgctggtcgagggcaaccagctggatgcc
gccaccgtgcaggccagcgtcgccgacagcgcgcgcttcgacttgttcggcctgctcgac
gcggcgctggccggcgaggcggcgcacgccctgcgcatgctcgagggcctgcgcggcgaa
ggcgtggaggcgccggtgatcctctggggcctggcgcgcgagctgcgcctgctcgccggc
ctggcccagcagcatggccagggcctgccgctggagcggctgatcgcccaggccaggccg
ccgatcttcggcaagcgccagggcctggtcggccgcgccgtgcagcgccatccggccagc
cgctggaaccagctgctgcgcgacgcccagcgcatcgacgagcagatcaagggccaggcg
cccggtaacgcctggaacggcctggcgcaactgaccctggcgatcgccggcgtgcgcctc
aacctgcccagcgaatag
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