Pseudomonas sp. AN-1: SK095_12000
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Entry
SK095_12000 CDS
T11500
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
psao Pseudomonas sp. AN-1
Pathway
psao02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SK095_12000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psao02022
]
SK095_12000
02035 Bacterial motility proteins [BR:
psao02035
]
SK095_12000
Two-component system [BR:
psao02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
SK095_12000
Bacterial motility proteins [BR:
psao02035
]
Pilus system
Twitching motility proteins
SK095_12000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
HTH_30
AAA_19
Pre_tape_measure
HTH_28
HTH_20
VpsR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WPP44010
LinkDB
All DBs
Position
2558371..2559720
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AA seq
449 aa
AA seq
DB search
MAQRALIVDDEPDIRELLEITLGRMKLDTRCARNVKEAREWLAREPFDLCLTDMRLPDGT
GQELVQLIQQRYPQTPVAMITAYGSVDTAIDALKAGAFDFLTKPVDLGRLRELVATALRL
RAPQSAAEAGGSVDSRLLGDSPPMRALRKQIAKLSRSQAPVYISGESGSGKELVARLIHE
LGPRADKPFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKPGLFKAADGGTLFLDEVAD
LPLPMQVKLLRAIQEKAVRAVGGQQELAVDVRILSATHKDLAAEVAAGRFRQDLYYRLNV
IELGVPPLRERREDIPLLAERALARLAADCGLEPARLSAEALEKLKSYRFPGNVRELENM
LERAYTLCEDDLIQASDLRLGDAPAASASGEAAGQLTQIDDLEDFLENIERQAIMQALEE
TRWNRTAAAQRLGLSFRSMRYRLKKLGID
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacgagccctgatcgtcgacgacgaacccgacatccgcgaactgctggaaatc
accctcggccgcatgaagctggacacccgctgcgcgcgcaacgtcaaggaagcgcgcgag
tggctggcgcgcgagccgttcgacctgtgcctgaccgacatgcgcctgcccgacggcacc
ggccaggaactggtgcagctgatccagcagcgctacccgcagacgccggtggcgatgatc
accgcctacggcagcgtcgacaccgcgatcgacgcgctcaaggccggcgccttcgacttc
ctcaccaagccggtcgacctcggccgcctgcgcgagctggtggccaccgccctgcgcctg
cgcgccccgcagtcggcggcggaagccggaggctcggtggacagccgcctgctcggcgac
tcgccgccgatgcgcgccctgcgcaagcagatcgccaagctgtcgcgcagccaggcgccg
gtgtacatcagcggcgagtcgggcagcggcaaggagctggtggcgcggctgatccacgaa
ctcggcccgcgcgccgacaagccgttcgtgccggtcaactgcggcgccatcccctcggag
ctgatggagagcgagttcttcggccaccgcaagggcagcttcaccggcgcagtggaggac
aagcccggcctgttcaaggccgccgacggcggcaccctgttcctcgacgaggtggccgac
ctgccgctgccgatgcaggtcaagctgctgcgcgccatccaggagaaggccgtgcgcgcg
gtcggcggccagcaggagctggcggtggacgtgcgcatcctcagcgccacccacaaggac
ctggccgccgaggtcgccgccgggcgcttccgccaggatctctactaccgcctcaacgtc
atcgaactgggcgtgccgccgctgcgcgagcgccgcgaggacatcccgctgctcgccgag
cgcgccctcgcccgcctggccgccgactgcggcctggaaccggcgcgcctctccgccgag
gcgctggagaagctcaagagctaccgcttccccggcaacgtgcgcgagctggagaacatg
ctcgagcgcgcctacaccctctgcgaggacgacctgatccaggccagcgacctgcgcctg
ggcgacgcccccgccgccagcgccagcggcgaagccgccggccagctgacgcagatcgac
gacctcgaggacttcctcgagaacatcgagcgccaggcgatcatgcaggcgctcgaggaa
acccgctggaaccgcaccgccgccgcccagcgcctcggcctgtcgttccgctcgatgcgc
taccggcttaagaagctcggcatcgactga
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