Pseudomonas sp. AN-1: SK095_16230
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Entry
SK095_16230 CDS
T11500
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psao Pseudomonas sp. AN-1
Pathway
psao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SK095_16230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psao02000
]
SK095_16230
Transporters [BR:
psao02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SK095_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
nSTAND_NTPase5
AAA_25
AAA_22
nSTAND3
DUF1513
FeoB_N
AAA_29
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
WPP44789
LinkDB
All DBs
Position
3444043..3445152
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AA seq
369 aa
AA seq
DB search
MAETQGNDILVSFRSVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGF
ETPTAGEILLGGRAINKLPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMGKADIAE
RVKRALSMVQLEALAGRYPGQMSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHM
QMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRELYEEPCNAFVAN
FIGENNRINGRLVRRDGERCVVELPRGEQVEALAVRVGQPGELVSLSVRPERVRINGHSS
GCDNRFSGRVAEFIYLGDHVRVRLEVAGQNNFFVKQPIAELDPALAVGDVVPLGWQVEHV
RALDPLSAE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacgcaaggcaacgacatcctggtcagcttccgtagcgtgcagaagagctac
gacggcgagaacctgatcgtcaaagatctcaatctggacattcgcaagggcgaattcctc
accctgctcgggccgtccggttcgggcaagaccaccagcctgatgatgctggccggcttc
gagacccccaccgccggcgagatcctcctcggcggccgggcgatcaacaagctgccgccg
cacaagcgcgacatcggcatggtgttccagaactacgccctgttcccgcacatgaccgtg
gccgagaacctcgccttcccgctcagcgtgcgcggcatgggcaaggccgacatcgccgag
cgggtcaagcgcgcgctgagcatggtgcagctggaggcgctggccgggcgctacccgggg
cagatgtccggcggccagcagcagcgcgtggcgctggcccgcgccctggtgttcgagccg
cagctggtgctgatggacgagccgctcggcgcgctcgacaagcagctgcgcgaacacatg
cagatggagatcaagcacctgcaccagcgcctgggcgtcaccgtggtctacgtcacccac
gaccagggcgaggcgctgaccatgtccgaccgcgtggcggtgttccaccagggcgagatc
cagcagatcgccccgccgcgcgagctgtacgaggagccgtgcaacgccttcgtcgccaac
ttcatcggcgagaacaaccgcatcaacggccgcctggtgcgccgcgacggcgagcgctgc
gtggtcgagctgccgcgcggcgagcaggtcgaggcgctggcggtgcgcgtcggccagccg
ggcgagctggtcagcctgtcggtgcgccccgagcgggtgcgcatcaacggccacagcagc
ggctgcgacaaccgcttctccggccgggtcgccgagttcatctacctgggcgaccacgtg
cgcgtgcgcttggaggtggccgggcagaacaacttcttcgtcaagcagccgatcgccgaa
ctcgaccccgcgctggcggtgggcgacgtggtgccgctcggctggcaggtcgaacatgtc
cgcgccctcgatccgctgagcgcggaataa
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