Pseudomonas sp. AN-1: SK095_16610
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Entry
SK095_16610 CDS
T11500
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psao Pseudomonas sp. AN-1
Pathway
psao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SK095_16610 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psao03021
]
SK095_16610 (rpoA)
03400 DNA repair and recombination proteins [BR:
psao03400
]
SK095_16610 (rpoA)
Enzymes [BR:
psao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SK095_16610 (rpoA)
Transcription machinery [BR:
psao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SK095_16610 (rpoA)
DNA repair and recombination proteins [BR:
psao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SK095_16610 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WPP44854
LinkDB
All DBs
Position
3506578..3507579
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGPGAVTAADIQLDHD
VEIVNGDHVIANLADNGALNMRLKVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RLAYVVESARVEQRTNLDKLVLDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSAPV
VEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagtttctgaccccccgtcacatcgacgttcaggtggtcagc
ccgacccgcgccaagatcacgctcgagcctctcgagcgcggttttggtcacacactgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgcgcagtggttgaggctgaa
atcgatggcgtactccacgagtacagcgccatcgagggtgtgcaggaagatgtgatcgag
atcctgctcaacctgaaaggcctggccatcaagctgcacggtcgtgatgaagtgacgctg
accctttccaagaagggtccgggtgcggtcaccgctgccgatattcagctggatcacgat
gtcgagatcgtgaacggtgaccacgtcatcgccaacctggcggacaacggtgccctgaac
atgcgtctgaaagtggcgcgcggccgtggctatgagcccgccgacgcccgccagagcgac
gaggacgagagccgttcgatcggccgcctccagctcgacgcctcgttcagcccggtccgt
cgcctggcctacgtggtggaaagcgcccgtgtcgagcagcgtaccaacctggacaagctg
gtcctcgacctggaaaccaacggtaccctggatcccgaagaggccatccgtcgtgccgcg
accatcctgcagcagcagctggccgcgttcgtcgacctcaagggtgacagcgctccggtg
gtggaagagcaggaagacgagatcgacccgatcctgctgcgccccgtcgatgatctggaa
ctgaccgtgcgttcggccaactgcctgaaggcggagaacatctactacatcggtgacctg
atccagcgcaccgaagtggagctgctcaagacgccgaacctgggcaagaagtccctgacc
gagatcaaggacgttctggcttcccgcggtctttccctcggcatgcgcctcgacaactgg
ccgccggcaagtctgaaaaaggatgacaaggcgactgcctga
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