KEGG   Pseudomonas sp. AN-1: SK095_17875
Entry
SK095_17875       CDS       T11500                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psao  Pseudomonas sp. AN-1
Pathway
psao03030  DNA replication
psao03430  Mismatch repair
psao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SK095_17875
   03430 Mismatch repair
    SK095_17875
   03440 Homologous recombination
    SK095_17875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psao03032]
    SK095_17875
   03400 DNA repair and recombination proteins [BR:psao03400]
    SK095_17875
Enzymes [BR:psao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SK095_17875
DNA replication proteins [BR:psao03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SK095_17875
DNA repair and recombination proteins [BR:psao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SK095_17875
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: WPP45096
LinkDB
Position
complement(3789859..3790584)
AA seq 241 aa
MNPIRALLSRLQRRHLELDDQQRQRLRALPPPPPPALATPLHRQRFVVLDLETTGLNLSR
DIVISIGAVAIDGGAIDMAQQFECTLRRQVKVNEAVLIHGIAPSELAAGQPPAEALLSFM
EFAADSVMLAFHAPFDQRMLARALKHELGYSLENPFLDVADLAPMLFPEVLTRRGSLDFW
MDYFGLDIAQRHHASADALATAEIALILFNRARRMGIERVDELAERVRYWQRAREAAQRS
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaatccgatccgcgccctgttgtcccgcctgcagcgccgccacctggaactcgacgac
cagcagcgccagcgtctgcgggcgctgccgccgcctccgccgcccgcgctggcgaccccg
ctgcaccggcagcgcttcgtggtgctcgacctggaaaccaccggactgaacctcagccgc
gacatcgtcatctcgatcggcgcggtcgccatcgacggcggcgccatcgacatggcgcag
cagttcgaatgcaccctgcgccgccaggtcaaggtcaacgaggccgtgctgatccacggc
atcgcgcccagcgagctggccgccggccagccgccggccgaggccctgctcagcttcatg
gagttcgccgccgacagcgtgatgctggccttccacgcgcccttcgaccagcgcatgctg
gcccgcgcgctgaagcacgaactgggctacagcctggaaaaccccttcctcgacgtcgcc
gacctggcgcccatgctgttccccgaggtgctgacccggcgcggcagcctggatttctgg
atggactacttcggcctcgacatcgcccagcgccaccacgcctcggcggatgccctggcc
actgcggaaatcgccctgatcctgttcaaccgcgcccggcgcatgggcatcgagcgggtc
gacgaactggccgagcgggtcaggtactggcagcgcgcccgcgaggccgcgcagcgctcc
atctga

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