KEGG   Paracoccus saliphilus: JHX88_03165
Entry
JHX88_03165       CDS       T08849                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
psap  Paracoccus saliphilus
Pathway
psap02024  Quorum sensing
psap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JHX88_03165 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JHX88_03165 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psap03019]
    JHX88_03165 (hfq)
   03036 Chromosome and associated proteins [BR:psap03036]
    JHX88_03165 (hfq)
Messenger RNA biogenesis [BR:psap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     JHX88_03165 (hfq)
Chromosome and associated proteins [BR:psap03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    JHX88_03165 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM AcMNPV_AC11
Other DBs
NCBI-ProteinID: WCR03779
UniProt: A0AA45W6U2
LinkDB
Position
679752..679985
AA seq 77 aa
MASDKQNLQDAFLNHVRKAKVPVTVFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHA
ISTIMPGQPISLYEGED
NT seq 234 nt   +upstreamnt  +downstreamnt
atggccagcgataagcaaaacctgcaggacgcctttctcaatcacgtccgcaaggccaag
gtgccggttacggtgttcctgatcaatggcgtcaagcttcagggcgtgatcacctggttc
gacaatttctgcgtgttattgcgccgcgacggacaatcccagctggtttacaagcatgcg
atcagcacgatcatgccgggccagccgatttctctttatgaaggcgaggattga

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