Paracoccus saliphilus: JHX88_03955
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Entry
JHX88_03955 CDS
T08849
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
psap
Paracoccus saliphilus
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psap03000
]
JHX88_03955
Transcription factors [BR:
psap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JHX88_03955
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_IclR
HTH_23
MarR_2
HTH_24
HTH_Tnp_ISL3
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WCR03922
LinkDB
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Position
845112..846023
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AA seq
303 aa
AA seq
DB search
MSRRLPNLNAVRAFDAAARHQSFSRAADELGVTHGSVSRYIKNLEADLGLQLFERRHRQV
ALTPAGARYAGTVAEALVLISLETGTRVAGGARGKVVLDVDSDLALLWLMPRLDRAGLDA
LGIDIELRSDPEPPRTIAPSTDLAITWGPIDAPGYSREPLLSFTSFPVCAPDLAAEMRRT
GLAGQRLIHDRSMGSWDEILRREGLALSSAAGHLTFHRTYLCLDAAAQGLGIAIGDDVTT
AEMLKAGRLIRPFGPDMPGRKAFYLSTSSRSPIRPPVLALRNWLLAQAEDHAQRIEGEAS
GSD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgcctccccaatctgaacgccgtccgcgctttcgacgcggcggcccgccat
cagagtttttcacgcgcggctgacgagcttggcgtcacgcatggctcggtcagccgctat
atcaagaacctggaggccgatctgggccttcagcttttcgagcgccgtcaccggcaggtg
gcactgacccccgccggggcccgttatgccgggactgtcgccgaggcgcttgtgctgatc
tcgctagaaacggggacacgggttgccggaggcgccaggggcaaggtggtgctcgatgtc
gattccgacctggcgctgttatggctgatgccgcggctggaccgggcgggactggacgcg
cttggcatcgacatcgaattacgatccgatcccgaaccgccgcggacgatcgcgccaagc
acggatcttgccatcacatgggggccgatcgatgcgccgggatattcgcgggagccgtta
ctgagtttcacttcttttcccgtctgcgccccggatctggccgcagagatgcggcggacg
gggctggccggtcagcggttgatccatgaccggagcatgggaagctgggacgagatcctc
aggcgcgaggggctggcattgtcctcggcggcggggcacctgacctttcaccggacctat
ctttgcctcgatgccgcggcgcaggggttgggaatcgccatcggcgacgatgtgaccacg
gcagagatgctgaaggccgggcggctgatccgtccctttggcccggatatgccgggccgc
aaggcgttttacctgtcgaccagcagccggtcgccgatccgcccgccggttttggcgctt
cgcaactggttgttagcgcaggcagaggatcatgcgcagcggatcgaaggcgaggcgtcg
ggcagcgattga
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