Paracoccus saliphilus: JHX88_06305
Help
Entry
JHX88_06305 CDS
T08849
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psap
Paracoccus saliphilus
Pathway
psap00260
Glycine, serine and threonine metabolism
psap00460
Cyanoamino acid metabolism
psap00630
Glyoxylate and dicarboxylate metabolism
psap00670
One carbon pool by folate
psap00680
Methane metabolism
psap01100
Metabolic pathways
psap01110
Biosynthesis of secondary metabolites
psap01120
Microbial metabolism in diverse environments
psap01200
Carbon metabolism
psap01230
Biosynthesis of amino acids
psap01240
Biosynthesis of cofactors
psap04981
Folate transport and metabolism
Module
psap_M00140
C1-unit interconversion, prokaryotes
psap_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JHX88_06305
09102 Energy metabolism
00680 Methane metabolism
JHX88_06305
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JHX88_06305
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JHX88_06305
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JHX88_06305
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JHX88_06305
Enzymes [BR:
psap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JHX88_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WCR04340
LinkDB
All DBs
Position
complement(1342009..1343304)
Genome browser
AA seq
431 aa
AA seq
DB search
MNAPTRDNGFFTEALTNRDPEIAGAIGKELGRQRDEIELIASENIVSKAVLEAQGTVLTN
KYAEGYPGKRYYGGCQYVDIVENLAIERAKKLFDCEFANVQPNSGSQMNQAVFLALLKPG
DTFMGLDLNSGGHLTHGSPVNMSGKWFNVLSYGVRQQDQLLDMEAVAEAARQHKPKLILA
GGTAYSRIWDWAAFRKIADEVGAYLMVDMAHIAGLVAGGQHPSPLPHAHVVTTTTHKSLR
GPRGGMVLTNDADIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALEPSFKDYAAQVVTN
ARAMADELMKGGIDIVSGGTDNHLCLADLRPKGVTGKATEAALGRAHITCNKNGVPFDPE
KPFVTSGIRLGTPAGTTRGFGEAEFRLIARWIVEVVDGLAANGEEGNGATEDKVRAEVAE
LCARFPLYPDL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacccacccgcgacaacggatttttcaccgaagccctgaccaaccgcgacccc
gagatcgccggcgccatcggtaaggaacttggccgtcagcgcgacgagatcgaactgatc
gcgtcggagaacatcgtctcgaaggcggttctcgaggctcagggcacggtcctgaccaac
aaatatgccgaaggctatccgggcaagcgctattatggcggctgccaatatgtggacatc
gtcgagaacctggccatcgaacgcgccaagaagctgttcgactgcgaattcgccaatgtc
caacccaatagcggcagccagatgaaccaggccgtgttcctggcgctgctgaaacccggc
gacaccttcatggggctggacctgaattccggcggtcacctgacccatggctcgcccgtc
aacatgtcgggcaaatggttcaacgttctcagctatggcgtgcgccagcaggatcagctg
ctggacatggaggcggttgccgaggccgcgcgccagcacaagcccaagctgatcctggct
ggcggcaccgcctatagccgcatctgggactgggcggcattccgcaagatcgccgacgag
gtgggtgcctacctgatggtggacatggcccatatcgccgggctggtcgcgggcggacag
catccctcgccgctgccgcatgcgcatgtggtgaccaccaccacgcataaatcgctgcgc
ggtccgcgtggcgggatggtgctgaccaatgacgccgatatcgcgaaaaagatcaattcg
gcggtcttccccggcctgcagggcggtccgctgatgcatgtgatcgccgccaaggcggta
gctttcggagaggccctcgagcccagcttcaaggattacgcggcacaggtcgtcaccaat
gcccgcgccatggcggacgagctgatgaagggcggcatcgacatcgtgtcgggcggcacc
gacaaccatctgtgcctcgccgacctgcgtcccaagggcgtgacaggcaaggcgaccgag
gccgccctgggccgcgcgcatatcacctgcaacaagaacggcgtgcccttcgatcccgaa
aagccctttgtcacctcgggcatccgccttggtacccccgcaggcaccacgcgcggtttc
ggagaggccgagttccggctgattgcccgctggatcgtcgaggtcgtcgatggccttgcc
gccaatggcgaagagggcaacggcgccaccgaggacaaggttcgcgctgaagtggccgaa
ctctgcgcgcgcttcccgctctatccggatctgtga
DBGET
integrated database retrieval system