Paracoccus saliphilus: JHX88_08210
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Entry
JHX88_08210 CDS
T08849
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psap
Paracoccus saliphilus
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psap03009
]
JHX88_08210
Enzymes [BR:
psap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JHX88_08210
Ribosome biogenesis [BR:
psap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JHX88_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
WCR04686
LinkDB
All DBs
Position
complement(1728693..1729916)
Genome browser
AA seq
407 aa
AA seq
DB search
MSLWQIERLGRRGDGVAIGSDGRALAPLTLPGEEIEGEAQDGRIASPRILTPSPDRVKPV
CKHYRACGGCSLMHASEGFTAAWKAQVVEAALAAHGLRAPVTGMHISPPRSRRRAVLSGR
RTKRGALIGFHARASDVIVELQECHVLHPGIMSALPILRQIVVAGASRSAEIGLTVIHSP
AGLDVAARGGKSLDAALFQALAGLADEGDLARLDWDGETITRRRPALPMGRAQVVPPPGA
FLQATDEGEAALLAVVKDMTLGAKRIVDLFAGCGTFSLPLAETAQVHAVEGLAAPLAALD
AAWRDTHGLQRVTTEIRDLARRPLMADELAGFDAIVIDPPRNGAEAQAREMAASGVPRIA
FVACDPVNFAKDAAILTNDNYMLSRLHIVDQFRWSPHIEIVAEFRRS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctggcagatcgaacggcttgggcggcgcggcgatggcgtagccattggatcg
gatgggcgcgccctcgccccgctgaccctgcccggcgaagagatcgagggagaggcgcag
gatggccgcatcgcctctccccgcatcctgacaccttcgcccgaccgggtgaaaccggtc
tgcaaacattaccgcgcctgcggaggctgctctctgatgcatgcctcggaagggttcact
gcggcatggaaagcgcaggtggtggaggcggcgctcgcagcgcatggtcttcgtgccccc
gtgacgggaatgcatatctcgccgccacgatcccgccgcagggcggtgctttcgggtcgg
aggacaaagagaggggcgctgatcggattccatgcgcgtgcctcggatgtgatcgtggag
ctgcaggaatgtcatgtgctgcatcccgggatcatgtcagctcttcccatcttgcggcag
atcgtggtggccggcgcatcgcgctcggcagagatcggcctgaccgtcattcatagccct
gccggcctggacgtggcggcacgcgggggaaaatcgctggatgcggcattgttccaggcg
ctggcggggctcgcggatgagggagatctggcccggctggattgggacggtgaaaccatc
acccgccgcagacccgccctgccgatgggacgcgcccaggtggtgcccccgcccggtgcc
ttcctgcaagccaccgacgagggcgaggccgccctgttggcggttgtgaaggatatgaca
ctgggcgcgaaacggatcgtcgatctgtttgcgggctgcgggacattctcactgcccctg
gccgagacggcgcaggtccatgcggtcgaaggtctggccgctccgctggcggcgctggac
gctgcctggcgcgatacccatggcctccagcgcgtcacgacagagattcgcgatctggcc
cgccgcccgctgatggcggatgaattggctggctttgacgcaatcgtgatcgacccgccg
cgcaacggggccgaggcacaggcgcgtgaaatggccgcatccggggtgccgagaatcgct
ttcgtcgcctgtgatccggttaatttcgccaaggatgcggcaatattaacgaatgacaac
tacatgttgtcgcgccttcacatcgtcgatcagttccgctggtcaccgcatatcgaaatc
gtcgccgagtttcgccgcagctag
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