Paracoccus saliphilus: JHX88_09475
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Entry
JHX88_09475 CDS
T08849
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psap
Paracoccus saliphilus
Pathway
psap00550
Peptidoglycan biosynthesis
psap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JHX88_09475 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psap01002
]
JHX88_09475 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psap01011
]
JHX88_09475 (dacB)
Enzymes [BR:
psap01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JHX88_09475 (dacB)
Peptidases and inhibitors [BR:
psap01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
JHX88_09475 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psap01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JHX88_09475 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WCR05234
LinkDB
All DBs
Position
complement(1992669..1994009)
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AA seq
446 aa
AA seq
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MATGLAQRPPAKPVPGSASLIARAALPGQVCYALFDPEGGAMLEDGAGWTPLAPASTLKM
VTALYALDRLGPSHRFRTRVMRAGDMLVLVGAGDPVLSSDDLADLAAKLADTGQEQPKRF
AVWGGALPRIEEIAPPQADHLAYNPALSGMILNFNRVYLGWRRGDGGYQMSLEARAARNS
PRAYTIAAHPGAQQDLFSYRFDEGREVWTVSRSAMGRAGSRWLPVRQPELYAGDVFQTLC
RAKGLVLPAPEVIDSLPAAEELVSHESPPLSKIVEDMLYYSTNLTAEVIGLHASDAPDLK
ASATRMQEWVADQGLPDGFSFADHSGLSAESRVTAAAMVRLLAGPGLKTGLPDLLKHDPL
AEVLDADTPRRAEVFAKTGTLNFVSNLAGYAAAPSGRRLAFATLCMDGPRHAASQGQDLP
AGVRSWTRRAKRLQHDLIESWVARFG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggcttgcacagcggccaccggccaagccggtgccgggaagcgcatcgctg
atcgcccgcgccgccctgccggggcaggtctgctatgcgctgttcgatccggaagggggc
gcgatgctggaagacggggcgggttggacgccccttgcgcccgccagcacgctcaagatg
gtgacggcgctttatgcactggaccggttgggaccgtcgcatcggttccgcacgcgtgtc
atgcgggcgggcgacatgctggtgctggtgggggccggggacccggtactgtccagcgat
gatctggcggatctggcggcgaagctggcggatacggggcaggaacagcccaaacgcttc
gccgtatggggcggtgcgctgccgcggatcgaggaaatagcaccgccgcaagccgatcac
ctcgcctataacccggcgctgtccggcatgatcctgaatttcaaccgggtgtatctgggc
tggcggcgtggggatggcggctaccaaatgtcgctggaggcgcgggcggccaggaattcc
ccgcgtgcctatacgatcgcggcccatcccggcgcacaacaggatctgttcagctaccgt
ttcgacgaggggcgcgaggtctggacggtttcgcgcagtgcgatgggccgggcgggtagc
cgctggctgccggttcgtcagcccgagctttatgccggggacgtgttccagacgctgtgc
cgcgccaaggggctggtcctgccggcgcccgaggtgatcgacagcctgcccgcggccgag
gaactggtcagccatgaaagcccgccgctcagcaagatcgtcgaggatatgctctattac
tcgaccaatctcaccgccgaggttatcggccttcatgccagcgacgcgccggacctgaag
gcctctgccacgagaatgcaagaatgggtcgcggatcaaggattgcccgatggcttcagc
tttgccgatcattccggcctgtccgccgagagccgggtaaccgcggcggcgatggtccgg
ttgctggcggggccggggttgaagactggattgcccgacctgctcaagcacgatccgttg
gccgaggtgctggacgcggacaccccccgccgggccgaggtcttcgccaagaccggaacg
ctgaatttcgtgtcgaacctggccggttacgccgccgcgccttcggggcggaggctggca
ttcgcgacgttgtgcatggatggtccgcgtcacgccgcaagccaggggcaggacttgccc
gcaggtgtccgcagctggacccggcgcgcgaagaggctgcagcatgacctgatcgagagc
tgggtggcgcggttcggctag
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