Paracoccus saliphilus: JHX88_12925
Help
Entry
JHX88_12925 CDS
T08849
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
psap
Paracoccus saliphilus
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psap03019
]
JHX88_12925 (hrpB)
Enzymes [BR:
psap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JHX88_12925 (hrpB)
Messenger RNA biogenesis [BR:
psap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JHX88_12925 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
CON_HrpB
HA2_N
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WCR01823
LinkDB
All DBs
Position
complement(2702054..2704471)
Genome browser
AA seq
805 aa
AA seq
DB search
MLEKLPIDDVIPALRDVMSAHGRAVLVAPPGAGKTTRVPLALVDQTRGKIVMLEPRRLAA
RAAAERLASGLGEAPGGQVGYRIRGEAVPGSRIEVVTEGILTRMIQSDPSLDGVGCVIFD
EFHERSLNADLGLALVWEAREALREDLAVLVMSATLEAEPVAALLDDAPVMRSEGRAFEV
ETRWLERPLPARARMADEAARLILRAEEETRETGGTVLAFLPGEGEIRRVSGMLGATGCE
VLPLYGALDAKAQRAALAPPGDRRRIVLATAIAETSLTIPEVRVVVDAGRSRRARFDPGS
GMSRLVTERVSRAEAGQRRGRAGRVAPGICYRMWARAEEGALPAFAPPEITVADLTGLAL
ELAAWGAEPADLAFLTPPPEGAFTEARTLLTELGALDRAGRITGHGKALARLPLHPRLAH
MLLLAGRGAADLAALLSDRDPLRGAPSDLALRLAAIRDPEAFADRYPHDLHRPGLQRIRE
EARRLRKLAPDADPMSAGAMAALAYPDRIGLRRKGEVPRFVLSGGKGAALEEGDVLAGQR
LIVAVDLDGDQREARIRMAAGLDGAELRALYGGQIEEVAICEWSRREARVLARRQERFGA
LVLSDRIWKDAPEDAVARAALEGLRQDGLPWTPAAARLRARIALVEGLGPVDDASLLADG
DWLLPWLGRCRTQADLRALDLSEALKARIGWDGQQRLAAEIPAHFVTPLGRKVPIDYDHE
APSIELRLQELFGVTRHPMVGGRPLRISLLSPGGKPVQVTMDLPGFWASSYGEVRKDMRG
RYPRHPWPDDPTEAAPTTRAKPRGT
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaagttgcccatagacgatgtaattcctgccctgcgcgacgtgatgtctgcg
catggccgggcggtgctggtcgcgccgccaggagcaggcaagacgacgcgggtgcctctg
gccctggtggaccagacccgcggcaagatcgtcatgctggagccgcggcggttggctgcg
cgggcggcggccgaacgtcttgcgtcgggactgggtgaagctcccggcggtcaagtcggt
tatcgtatccggggcgaggcggtgccgggcagtcggatcgaggtcgtcacagagggtatc
ctgacccggatgatccagtcggacccgtcgctggacggcgtcggctgcgtgatcttcgac
gaattccatgagcgcagcctgaacgccgatctgggccttgcgctggtctgggaggcgcgc
gaagcgctgcgcgaggacctggcggtgctggtgatgtcggccacgctggaggccgaaccg
gtcgcggcgctattggacgatgcgccggtgatgcgatccgaggggcgggccttcgaggtc
gaaactcgatggctggaacggcccttgcccgcgcgggcacggatggccgacgaggcggcg
cggctgatcctgcgggccgaggaggaaacacgcgagaccggcggcacggtcctcgccttc
ctgccgggagagggagagatccggcgtgtttccggcatgctgggagcgacgggctgcgag
gtgctgccgctttacggggcgctggatgccaaggcgcagcgggcggcgcttgcgccgccg
ggggacaggcggcggatcgtgctggcgacggcgattgccgaaacctcgctgaccatcccc
gaggtgcgggtggtcgtggatgccggccggtcgcggcgcgcgcgtttcgatcccggtagc
ggcatgtcgcggctggtgaccgagcgtgtcagccgcgccgaggcgggccagcgccggggg
cgcgcggggcgtgtggcgccgggcatctgctaccgcatgtgggcgcgggccgaagagggg
gcgctccccgcattcgctccgcccgagatcacggtcgccgatctgaccgggctggctttg
gagctggccgcatggggggcggaacccgccgatctggcgttcctgacgcctccccctgag
ggggcgttcaccgaggcccggactttgttgacggaacttggggcactggaccgggcaggg
cggatcaccggccacggcaaggcactggcgcggctgcccctgcatccgagattggcgcat
atgctgctgcttgccgggcgcggagcggcggatctggcggcgcttttgtcggatcgcgat
cctctgcgtggcgcgccctcggacctggcgctgcggctggcggcgatccgcgaccccgag
gcttttgcggaccgttacccccatgacctgcatcgccccggtttgcagcgtatccgcgaa
gaggcacggcggttgcggaaactggcccccgacgccgacccaatgtcagcgggcgcgatg
gccgcattggcctatcccgaccggatcggcttgcgtcgcaagggcgaggtgccgcgtttt
gtgctgtcgggcggcaaaggggcggcgctggaagaaggcgatgttctggccgggcaacgg
ctgatcgtcgcggtcgatctggacggcgatcagcgcgaggcacggattcgcatggccgcc
gggctggacggcgccgaattgcgggcgctttacggcgggcagatcgaagaggttgcgatc
tgcgaatggtcgcggcgcgaggcccgtgtattggcccgtcggcaagagcgtttcggggcg
ctggtgctgtcggaccggatctggaaggacgcgccggaggatgcggtggcgcgcgcggcg
ctggaggggttgcggcaggatgggctgccatggactcctgccgctgcccgcctgcgcgcc
cgcatcgcgttggtcgaggggctggggccggtggacgatgccagcctgctggccgatggc
gattggctgctgccatggttggggcgctgcaggacgcaggccgatctgcgcgcgctggac
ctgagtgaagccctgaaggcgcggatcggttgggacggtcagcaacgcctcgctgccgag
ataccggcgcatttcgtcacgccgctcgggcgcaaggtgccgatcgattacgaccatgag
gcgccgtcgatcgagctgcgcctgcaggaacttttcggcgtaacccgccatccgatggtc
ggcgggcgccccctgcgcatctcgctgttgtcgccggggggaaagccggtgcaggtgaca
atggacctgcccggcttctgggcgtcttcctatggcgaggtccgcaaggatatgcgtggc
cgctatccccgccacccatggcccgacgacccgaccgaggccgcgccgaccacacgagcc
aagccgcgcgggacgtag
DBGET
integrated database retrieval system
