Paracoccus saliphilus: JHX88_13260
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Entry
JHX88_13260 CDS
T08849
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psap
Paracoccus saliphilus
Pathway
psap03420
Nucleotide excision repair
psap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JHX88_13260
03430 Mismatch repair
JHX88_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psap03400
]
JHX88_13260
Enzymes [BR:
psap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHX88_13260
DNA repair and recombination proteins [BR:
psap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHX88_13260
MMR (mismatch excision repair)
Other MMR factors
JHX88_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
DUF3553
HTH_32
Motif
Other DBs
NCBI-ProteinID:
WCR01884
LinkDB
All DBs
Position
complement(2765346..2767718)
Genome browser
AA seq
790 aa
AA seq
DB search
MEPIDDSDTVPLSQRALAARPAPYLEGLNPAQRAAVETLEGPVLMLAGAGTGKTRALTTR
IAHLLMLGKARPGQILAVTFTNKAAREMKNRITALLGETVEGMPWLGTFHSICVKILRRH
AELIGNGELHLKPAFTILDTDDQIRLLKQLIQAENLDEKRWPARQLAHLIDGWKNRCLSP
ANLPRGEKAAFDGWGGQLYAAYQDRLLSLNAVDFGDLLMHCVTLFQAYPDVLKSWQERFR
YILVDEYQDTNVAQYMWLRLLAQAHRNICCVGDDDQSIYGWRGAEVGNILRFEQDFPGAQ
VVRLEQNYRSTPQILSAASGLIAANSGRLGKTLWTESEAGEKVRLIGHWDSEAEARWIGE
EIEAFQGGHRAGMDAVSLDDVAILVRASHQMRAFEDRFMTIGLPYRVIGGPRFYERAEIR
DAMAYFRLVVSPSDDLAFERIVNTPKRGVGDKALKTIQAVARQHGVPLLEGARIAVEEGQ
LGGKGLANLRDFVASHGRWRADALDAEASHVELAERILDESGYTVMWQNDKSPDAPGRLD
NLKELVKALEEFDNLQGFLEHVSLVMDRDNGEAGEEVSIMTLHGAKGLEFPVVFLPGWED
GLFPNQRAMDENGTKGLEEERRLAYVGITRAERLAVISFAGNRRLYGQWQSSMPSRFIDE
LPEDYIEVLTPPGLYGGGYGAAMAFAGANPGTDMHDRAAQADVYNSPGWKRMQARAAERK
APVARRAPVTIDAEAAAHFSVGDKVSHAKFGEGQIMGIAEDTLTVQFAAGFKTIKAAYVT
PAGNDQDVPF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagccgattgatgattccgataccgtcccgctgtcgcaacgtgcccttgccgcgcgg
cccgcgccctatcttgaaggtctgaacccggctcaacgcgccgccgtcgagactttggag
gggccggtgctgatgctggccggggcggggaccggcaagacccgggcgctgaccacgcgc
atcgcgcatctgctgatgctgggaaaggcgcggccggggcaaattctggccgtcacattc
accaacaaggccgcgcgcgagatgaaaaaccggatcaccgcgctgttgggcgagacggtc
gaggggatgccgtggctgggcaccttccattcgatctgcgtcaagatcctgcgccggcac
gcggaactgatcggcaatggcgagctgcatctgaaacctgccttcaccatccttgatacc
gacgatcagatccggcttctgaaacaactgatccaggccgagaacctggatgaaaagcgc
tggccggcccggcaattggcgcatctgattgatggttggaagaaccgctgcctgtccccg
gccaatctgccaaggggcgagaaggcggcattcgatggttggggcgggcagctttacgcg
gcctatcaggaccggcttttgtcgctgaacgccgtcgatttcggcgatctgctgatgcat
tgcgtaacgctgttccaagcgtatcccgatgtgctgaaaagctggcaggaacggttccgc
tatattctggtggacgagtatcaggataccaatgtcgcgcaatacatgtggttgcggctg
ctggcgcaggcgcatcgcaatatctgctgcgtaggcgatgacgaccagtcgatctatggc
tggcgcggtgccgaggtgggcaatatcctgcgtttcgagcaggatttccccggcgcgcag
gtggtgcggctggagcagaactatcgttcgaccccgcagatcctgtcggcggcatcgggg
ctgatcgctgccaatagcggacggcttggcaagacgctctggaccgagtcggaggcgggc
gagaaggtccgcctgatcgggcattgggacagcgaggccgaggcgcgctggattggcgag
gagatcgaggcattccagggcgggcaccgcgccgggatggacgcagtcagcctggatgat
gtcgcgatactggtgcgtgccagccatcagatgcgggctttcgaggaccgattcatgact
atcggcttgccctatcgcgtcatcggcgggccgcgcttttacgaacgggccgagattcgc
gatgcgatggcctatttccggctggttgttagcccttccgacgatctggctttcgagcgg
atcgtgaatacgcccaagcggggggtgggcgacaaggcactgaaaacgatccaggccgtg
gcgcggcagcatggggtgccactgctggaaggcgcgcggatcgcggtggaggaggggcaa
ctgggtggcaaggggctggccaatctgcgcgatttcgtggcgtcgcatgggcgttggcgc
gccgatgcgctggatgccgaggccagccatgtcgaactggccgagcggatactggacgag
tccggctataccgtcatgtggcaaaacgacaaatcgccggatgcgccggggcggcttgac
aacctcaaggaactggtcaaggcgctggaggaattcgacaatcttcagggcttcttggag
catgtttcgctggtcatggatcgcgacaatggcgaggcgggggaagaggtcagcatcatg
accctgcacggtgccaaggggttggaattccctgtggttttcctgccgggatgggaggat
gggctgttcccgaaccagcgcgccatggacgagaacggcaccaagggcctcgaggaagag
cgacggctggcctatgtcggcattacccgggctgagcgtctggcggtgatcagctttgcc
gggaaccggcggttatacgggcaatggcaaagctctatgccgtcaagattcattgatgaa
ctacccgaagactatatcgaagtcctgacgccgccggggctgtatggcggcgggtacggg
gctgcaatggcctttgccggggcgaatcccggaaccgatatgcatgaccgggcggcgcag
gcggatgtctataactcgccgggatggaagcggatgcaggcgcgggcggcagagcgcaag
gcgccagtggcgcggcgcgcgcccgtgaccatcgatgccgaggctgctgcgcatttcagc
gtcggggacaaggtcagccatgccaagttcggcgagggtcagatcatgggcatcgccgag
gatacgctgaccgtgcaattcgcggcggggttcaagacgatcaaggccgcctatgtgacg
cccgcaggcaatgatcaggacgtgccgttctag
DBGET
integrated database retrieval system
