Paracoccus saliphilus: JHX88_16665
Help
Entry
JHX88_16665 CDS
T08849
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psap
Paracoccus saliphilus
Brite
KEGG Orthology (KO) [BR:
psap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psap03032
]
JHX88_16665 (topA)
03400 DNA repair and recombination proteins [BR:
psap03400
]
JHX88_16665 (topA)
Enzymes [BR:
psap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JHX88_16665 (topA)
DNA replication proteins [BR:
psap03032
]
Prokaryotic type
DNA Topoisomerases
JHX88_16665 (topA)
DNA repair and recombination proteins [BR:
psap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHX88_16665 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WCR02481
UniProt:
A0AA45W3E7
LinkDB
All DBs
Position
3461109..3463778
Genome browser
AA seq
889 aa
AA seq
DB search
MPVVVVESPAKAKTIEKYLGGDYRVLASFGHVRDLPPKDGSVDPEQDFAMKWEVASDSKK
HLKAIKDALKEDNNLILATDPDREGEAISWHLLEALKTSLKGGKDVSRVTFNAITKAAVT
EAMKQPREIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVSLRIIVDRE
MEIEAFKPREYWSVHARLATPAGAEYDAQLVSLAGSKLERFDLADAEKAAMAVSAVASRD
LGVTGVTAKPASRNPWPPFMTSTLQQEASRKLGLGARACMSAAQRLYEAGLITYMRTDGI
DMAPEAVMAARDAVKAKFGEKYLPKSPRMYKNKAKNAQEAHECIRPTDMMTSPDKLRVTA
EDQRKLYDLIWKRTIASQMEAARMERTTVEIASPDGQVGLRATGQVMLFDGFLKVYDQGR
DDDEGDDSARLPAISEGEAAKLVSNAFASEFTKAQEKAEPAPEAPAGHRAAPGLLMNEAA
STAARQHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDREYVRKDKNRLIPEDK
GRLVTTFLVKYFPRYVSYDFTADMENELDEISAGDRMWRDVLGRFWKDFTKALEGTSELR
ISEVLDAIDDALAPHLYPPRADGGDPRECPLCGAGRLNLKTARSGGAFIGCSNYPECRYT
RPLSAPNGEEPVGDRVLGHDDGDEISLKTGRFGPYVQRGEATEEVPKPPRASIPKGWDPA
AMDLEKALRLLSLPRPVGPHPDDGELIEAGIGRYGPYVKHGRKYANLPEVDEVFTVGMNR
AVEVLAAKQTRGRTTAAPLKELGDHPDGGSIQVMNGRYGPYVKWEKINATLPRDLSPEDI
TKEQALELITAKAAKSPKKAAKKPASKGTKKTTAKKPAAKKTASKKAAG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtcgtcgtcgaatccccggccaaggccaaaaccatcgagaaatatctcggc
ggtgactatcgcgtgctggccagtttcggccatgtccgcgacctgccccccaaggatggc
agcgtcgatcccgagcaggacttcgcgatgaaatgggaagtcgcctccgacagcaaaaag
catctcaaggcgatcaaggatgcgctgaaagaggataacaacctgatcctcgccaccgac
cccgaccgcgagggagaggcgatcagctggcatctgctcgaagcgctgaagacctcgttg
aagggcggcaaggatgtcagccgagtcaccttcaacgccatcaccaaggccgccgtcacc
gaggcgatgaagcagccgcgcgaaatcgaccaggcattggtcgatgcctatctggccagg
cgcgcgctggactacctggtcggattcaacctctcgccggtgctgtggcgcaagctgccc
ggcgcgaaatcggcaggccgggtgcaatcggtcagcctgcgcatcatcgtcgatcgcgag
atggaaatcgaggcgttcaagccccgcgaatactggtccgtccatgctcgcttggcgaca
cccgcaggggcggaatatgacgcacaactggtttcgctggctggctccaagctggaacgc
ttcgatctcgccgacgcggaaaaggccgccatggccgtcagtgccgtcgcctcccgcgac
ctcggcgtgaccggtgtcaccgccaagcccgccagccgcaacccgtggccgcctttcatg
acttcgaccctgcagcaagaggccagccgcaagctgggccttggcgcgcgggcctgcatg
tcggcagcgcaacggctgtatgaggccgggctgatcacctatatgcggaccgacggcatc
gacatggccccggaggcggtgatggccgcccgcgacgcggtcaaggcgaagttcggcgag
aaatacctgccgaaatcgccgcgcatgtacaagaacaaggccaagaacgcgcaggaagct
cacgaatgtatccggccgaccgacatgatgacgtccccggacaagctgcgtgtgacggca
gaggatcagcgcaagctttatgacctcatctggaagcgcaccatcgccagccagatggag
gccgcgcggatggaacgcaccacggtcgagatcgccagccccgacgggcaggtcgggctg
cgcgccaccggtcaggtgatgctcttcgacggctttctgaaggtttacgatcaaggccgc
gacgatgacgagggcgatgacagtgcccgcctgcccgccatttccgagggcgaggcggcg
aagctggtgtcaaacgccttcgcctcagagttcaccaaggcgcaggaaaaggccgaaccc
gcccccgaggcacctgcggggcatcgcgccgcgcccggcctgctgatgaacgaggcggct
tcgaccgccgcgcgccagcatttcacccagcccccgccccgctataccgaggccacgctg
gtcaagcggatggaggaactgggcatcggccgaccttcgacctatgccagcatcgtcacc
acgatccaggaccgcgaatatgtccgcaaggacaagaaccgcctgattcccgaggacaag
ggccgtctggtcaccacattcctggttaagtattttccgcgctatgtcagctatgacttc
accgccgacatggagaacgagctggacgagatcagcgctggcgaccgaatgtggcgcgac
gtcctgggccggttctggaaggatttcaccaaggcgctggaaggcacgtccgagctgcgc
atcagcgaagtgctggacgccatcgacgacgcgctggcaccgcatctctatcctccccgc
gccgacggaggcgatccgcgcgaatgcccgctttgcggcgcaggccggctgaacctgaag
accgcgcgttcgggcggggccttcatcggttgttcgaactaccctgaatgccgctatacc
cgcccgctctctgccccgaatggcgaggaaccggtaggcgaccgagtgctcggtcatgac
gatggcgacgaaatcagcctgaaaaccggtcgcttcggcccctatgtccagcgcggcgag
gcgaccgaggaagtgccgaaaccgccgcgcgcctctatccccaagggatgggatccggcc
gcgatggacctggaaaaggcgttgcggcttctgtccctgccccgccccgtcggtccgcat
cccgatgatggcgagctgattgaggcgggcatcgggcgttatggcccctatgtcaagcat
ggccgcaaatacgccaatctgcccgaagttgacgaagtcttcaccgtcggcatgaatcgc
gcagtcgaggttctggcggccaagcagacgcgcggacgcaccaccgccgcaccgttgaaa
gagcttggcgaccatccggatggcgggtccatccaggtgatgaacgggcgctacggcccc
tatgtcaaatgggaaaagatcaacgcgaccctgccccgcgacctctcgcccgaggatatc
accaaggagcaagcgctcgagctgatcaccgccaaggccgcaaaatcgcccaagaaagcc
gcgaagaaaccggccagcaagggcaccaagaaaaccacagccaagaaaccggcggcgaaa
aaaaccgccagcaagaaagcggccggataa
DBGET
integrated database retrieval system
