Pisum sativum (pea): 127073506
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Entry
127073506 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127073506 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127073506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127073506
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127073506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_12
ARM_TT21
TPR_1
TPR_19
ARM_TT21_N
TPR_8
DUF627
TPR_10
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
127073506
NCBI-ProteinID:
XP_050870625
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Position
4:complement(76088358..76094893)
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AA seq
844 aa
AA seq
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MESRDSLPSSSPSTNNRDAPSAAAEVDDGLFALAKDAAMHYQSGKFVECVEVMNQLLQKK
PNDPKVLHNIAIAEFFRDGCSDPKKLLEVIYNIKRKYDELTLTSRDQGEPVNNVANKVAF
GSKGSNSTDTMHPDEFESTATALNIAIIWFHLHDYAKTVSVLEPLFQRIDPITDQSTALH
ICLLLLDASLACHDASKSADVLTYLERLFSGTASQGDGNTSQQQSANLTSKSAPVTISES
AADPSSSDIGSNANTSENHLIRTLSEDGLDYEAMILDMGGQNLTRPMGPSSNVLSRALVD
RFSSLDLKLKLQLYKVQFLILTRNLKIAKREVKLAMNIARGRDSSRALLLKSQLEYARGN
HRKAIKLLMASSNNRTDTEFSSIFNNNLGCIYYQLGKYQSSSIFFSKALTNCSSLRKEQQ
LKLTTFSQDISLLIIYNCGVQHLACGKPILAARCFQKASLVFYKQPLLWLRLSECCLMAL
EKGLIKSCRVPSEKLEVGACVVGLEKWRQLVVKDQIPGNGHLESSRGNERCPSEDGWLKL
SMSLARQCLLNALHLLDSYSTNRLKSGLPSNSSVENDTSEVLPSKNSSRKNSHVIDSKTF
PVATGLGQINSNGDTKEQKGGASQELFQNSLSYYEDVCRRDNQLVKQAVLANLAYVELEL
DNPVKALAAAKSLFELPECSRIYIFLGHVYAAEALCLLNRPKEAAEYLSYYLSGGNNVEL
PFSQEDCEKLQVERTVEFEEVNVGSTAAKSSLQDTQSIVFLKPEEARATIYANFAVMSAM
QGEFEKANMLVTQALSILPNSPEATLTAVYVDLLLGKQQEALAKLKSCSRIRFLPSGITL
NKSS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcgtgattcgttaccttcttcttctccctcaaccaacaaccgcgatgctcct
tccgccgccgccgaagttgacgacggccttttcgctctcgccaaagacgctgctatgcat
tatcaatctggcaagttcgttgaatgcgtcgaggtcatgaatcagctcttgcaaaagaaa
cctaacgatccgaaggtccttcataatatagcaattgcagaattctttcgagatggttgt
tctgatcccaaaaagttgcttgaagtaatttacaacatcaagagaaaatacgacgagctt
accctgacttctagggatcaaggagagccagttaacaacgtcgcaaataaagttgctttt
ggatccaaaggaagcaatagcactgacacaatgcatccagatgaatttgaatctactgcc
acagcactaaatattgcgatcatctggtttcatcttcatgactatgcaaagacagtatca
gttttggaacccctatttcaaaggattgaccccataactgaccagtcaacagctctacat
atttgtcttctgctgcttgatgctagccttgcctgccatgatgcatcaaaatcagctgat
gtgttgacttatctggagaggctgtttagtggtactgcgagtcaaggcgatgggaataca
tcacagcaacaatctgcaaatcttacctctaagtctgcacctgtcaccattagtgaatct
gctgctgatccatccagttctgatatagggtcaaatgctaatacatctgaaaatcatcta
atcagaactttgtctgaagacgggcttgattatgaagccatgattttggatatgggtgga
caaaatttaactaggccaatgggcccgtcttcaaatgttctttctagagctttggttgac
aggttttcttctcttgatttaaagcttaagttgcaactttacaaagtacagtttctaatt
cttactagaaacctgaagatagcaaaaagagaagtcaagctggctatgaacattgcacgt
ggacgagattcatccagggctctgcttttgaaatctcagcttgaatatgctcgtggtaac
caccgcaaggccataaagctattgatggcatcaagtaataataggacagacacagaattt
tcaagcatatttaacaacaatcttgggtgcatttattatcagcttgggaaatatcagtca
tcctcaattttcttctcaaaagcattaactaattgttcgtccttgagaaaggagcaacaa
ttaaagctgaccactttctcgcaggatatttctctccttataatttataattgtggtgtg
cagcacttggcttgtggaaagccaatacttgcagctcgatgttttcagaaggcaagctta
gtcttctacaaacaacctctcttgtggctccgactctcagaatgctgtctgatggcgtta
gagaagggcctgatcaaatcatgtcgggttccttcagagaagttggaggttggagcttgc
gttgttgggttggaaaaatggaggcaacttgttgtgaaagatcaaattccaggtaatgga
cacttggaatcatccagagggaatgaacgttgtccaagtgaagatgggtggctgaagtta
tcgatgtcccttgctcggcagtgtctcttgaatgctcttcacttgctcgactcgtacagt
acaaatcgtttaaagtctggcttgccctctaattcatctgtggagaacgatacgagtgaa
gtgttgccctcaaagaattcaagtcgtaaaaactcccatgtaattgattcaaagacattt
ccagtagcaacaggtttaggtcagataaactcaaatggggacacaaaagaacagaaggga
ggagctagtcaggaactctttcagaactccctatcgtattatgaagatgtctgtagaaga
gataatcaattggttaagcaagctgttcttgctaatttagcttatgtggagctagaattg
gacaatcccgtgaaggcacttgcagctgcaaaatctctctttgaacttccagaatgttcc
agaatttacatttttttaggccatgtttatgcggcagaggctctttgcttactgaacaga
ccaaaggaagctgctgagtatttgtcatattatttgtctggaggaaacaatgttgaattg
ccattcagccaagaggactgtgagaaattgcaagtagagaggactgttgaatttgaagag
gtaaatgttggatccactgctgccaagagttctcttcaggatacgcaaagtattgttttc
ctcaagccagaggaggcacgggcaacaatttatgcaaactttgctgtaatgtctgcaatg
cagggtgaatttgagaaagccaatatgttggttacccaggcattgtccatattgcccaac
agtccagaagctacgctcactgcagtttatgtggatctcctgcttggtaagcaacaggaa
gctctagccaagctaaaaagttgtagccgtattaggttcctgcccagtggaataacatta
aataaatcttcatga
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