Pisum sativum (pea): 127073645
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Entry
127073645 CDS
T08598
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
psat
Pisum sativum (pea)
Pathway
psat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127073645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psat03400
]
127073645
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127073645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
127073645
NCBI-ProteinID:
XP_050870774
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Position
4:complement(97678384..97688235)
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AA seq
943 aa
AA seq
DB search
MDENFDAFDNKLPELKLDSKQAQGFLSFFKTLSDDPRAIRFFDRRDYYTAHGENATFIAK
TYYHTTTALRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKS
GTPGNIGSFEDVLFANSEMQDSPVVVALSLNFRESGCTVGLGFVGLTKRLLGMAEFLDDS
HFTNLESALVALGCKECLVSIERRKSIEYKMLCDVLTKCGVMLTERKKSEFKTRDLVQDL
GRLVKGSIEAVQDLVSGFEFAPGALGALLSYAELLADESNYGNYTLRRYNLDSYMRLDSA
AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINLRLDVVQA
FVEDTVLRQDLRQHLKRMSDIERLVHNLQKRRAGLQHVVKLYQSSIRLPYIKGALDRYDG
QFSSMMKSRYLKDLELWTGVDRLNKFIELVETAVDLDHLENGEYMISSSYDTALSELKEK
QELLESQIHNLHKQTADDLDLHIDKTLKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL
ETRKDGVKFTNTKLKKLGDKYQQILEDYKSCQKQLVIKVVEIAATFSEVFESLAALISEL
DVLLSFADLASSCPTPYTRPDITSSDEGDIILEGCRHPCVEAQDWVNFIPNDCKLIRGKS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFAT
HFHELTALAHENGSNDQHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPSAISLIDSSVEEVGSKRKRVFESDDMSKGAAKARQ
ILEAFVALPLETMDKTQAMQEVRKLKDNLEKDAQNCLWLQKFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatttcgacgcctttgataataaactccccgagctcaaattagattctaag
caagcgcaagggtttctgtcctttttcaaaaccctatctgatgacccgagggccattaga
ttttttgatcgtcgggattactatactgcccatggtgaaaatgcaacattcattgccaaa
acctactatcacactactactgctctacgacaattgggtagtggatcaaatgctctttcc
agtgtgagtgtcagtaggaacatgtttgaaacaattgcccgtgatctactcttggagaga
acagaccatacacttgaggtctatgagggcagcggctctaactggagactggtcaaaagt
ggtacacctggtaatattggcagttttgaagatgttctgtttgctaacagtgaaatgcag
gattctccagttgttgttgcactgtcacttaacttccgtgaaagtgggtgcaccgttgga
ttaggatttgttggtctaactaagagactactagggatggctgaatttcttgatgacagt
cacttcacaaatctggagtcagcattggttgctcttggctgcaaagagtgccttgtgtca
attgaacgtcgaaaatctattgaatataaaatgttgtgtgatgtgttgactaagtgtggt
gtgatgctaactgagagaaagaaatctgaattcaagactagagatctggtacaggatctt
ggcaggcttgtcaaaggttctattgaagcagttcaagatttagtttctggatttgaattt
gcacctggtgctttgggggcactgctctcttatgcagagttacttgcagacgaaagcaat
tatggaaattatactctgcgtcggtacaatcttgatagttacatgaggttagattctgca
gccatgagggcacttaatgtcttagaaagtaaaacagatgcgaataaaaatttcagtttg
tttggtctcatgaatagaacctgtacagctggaatgggaaaacggttattgcacatgtgg
ctaaagcagccattattagatgtaaaagaaattaacttgaggttggatgtagtacaagca
tttgtagaggacaccgtgcttcggcaagatctgaggcagcatctgaaaagaatgtcagac
attgagcgactggtgcacaatcttcagaagcgaagagctggtttgcaacatgttgttaaa
ctatatcagtcaagtataagattgccttacattaaaggtgccctggataggtatgatgga
cagttttcttcaatgatgaagagcaggtatttgaaagatttggagttatggactggtgtt
gatcgcctaaataaatttattgagcttgtagaaactgctgttgaccttgatcatctggag
aacggggaatacatgatttcttcaagttatgacactgcactatctgaacttaaggagaag
caagaattactagagagtcaaatacataacttgcataaacaaactgctgatgatcttgat
ctgcatatagataagacattaaagttagataagggcacacaatttggacatgtttttaga
atcacaaagaaggaagagccaaaaataagaaagaagctcaacacccaatttattgtactt
gaaacccgtaaagatggagtgaagtttactaacacaaagctcaaaaaattgggagacaaa
tatcaacaaattcttgaggactacaagagctgtcaaaaacagttggttattaaagtagtg
gaaattgcagcaaccttctctgaggtgtttgaatctttagctgcattaatttccgaattg
gatgtgttactaagctttgctgatctggcttctagttgtcctactccctatacaaggcct
gatatcacctcatcggacgaaggagatattattttagaaggttgcagacacccttgtgtg
gaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagaggaaaaagt
tggtttcaaataataacaggtccaaacatgggtgggaaatcaacattcatccggcaggtg
ggcgtgaatattttgatggcgcaagttggttgctttgttccatgtgacaaagccagcata
tctgttcgtgattgcatttttgctcgtgttggtgcaggtgactgccaacttcgtggagtt
tctacctttatgcaagaaatgcttgaaactgcatcaatattaaaaggagctactgacaag
tccttgataatcattgacgagttgggacgtgggacatctacttacgatggatttggtctt
gcttgggccatttgtgagcacatagttgatgtgataaaagcccctactttatttgcaact
cattttcatgaactgactgcattagcccatgaaaatggtagcaatgatcaacataaacaa
attgttggtgtggcaaattatcatgttagtgcacatattgatgcatctactcgcaagcta
actatgctatacaaggttgaaccaggagcttgtgatcagagttttggtattcatgtcgct
gagtttgcaaacttccctgaaagcgttgttgccctagctagagaaaaggctgcagaacta
gaagatttttctccttctgcgatatccttaattgattcttctgtagaggaggtgggttct
aaacgtaagagagtatttgaatctgatgacatgtctaaaggggccgcaaaggctcgccaa
atccttgaagcttttgttgctttgccactagaaaccatggacaaaacgcaagcaatgcaa
gaagttaggaagttgaaagataatttagagaaggatgcacaaaactgtctttggttgcaa
aaattcttgtag
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