KEGG   Lathyrus oleraceus (garden pea): 127073922
Entry
127073922         CDS       T08598                                 
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    127073922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psat03009]
    127073922
Ribosome biogenesis [BR:psat03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    127073922
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Utp13 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_HPS5 Ge1_WD40 Beta-prop_ACSF4 RAB3GAP2_N WD40_like Cytochrom_D1 DUF7973 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 127073922
NCBI-ProteinID: XP_050871128
LinkDB
Position
4:119764815..119772948
AA seq 911 aa
MESLRLKTNYRCVPALQQFYTGGPFAVSSDGSFIVCACGDSIKIVDSANASIRSTLEGDS
EQVTALALSPNDKLLFSSSHSRQIRVWDLSTLKCVRSWKGHDGPVMCMACDASGGLLATG
GADRKVLVWNVDAGYCSHFYKGHGGVVSCVMFHPDPKKQLLFSGSDDGGDNATVRVWDIS
NPKRKTCIAILDNHRSAVTSIAVSEDGWTLLSAGRDKIVTLWDLHDYSSKKTVITNEAVE
SVCPIGAGSPFALSLDSYRQNSKKHAGSQATHFVTVGERGIVRIWSSEGAVCLFEQKASD
VTNNTDEDGSRRGFTSAVMLGSNQGLLCVTADQQFLFYSLNWIEELLQLNLTKRLVGYNE
EVVDMKFVGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIVLCLDTCVSSSGRNLI
VTGSKDNTVRLWDSESTSCIGAGIGHMGAVGAIAFSKKKRDFFVSGSSDHTLKVWSMDGL
LDNLTAPINLKAKAVVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKSNECVATYDHHEDKVWALAVGSKTELLATGGSDAVVNLWLDSTAAD
KEEAFRKEEEGVLKGQELENALSDADYTKAVQIAFELRRPHKLLELFAELCRKKGAEDHV
DRALKAFGNEELRLLFNYIREWNTKPKLCYVSQFVLFRVFNIFPPTEIVQIKGVGELLEG
LIPYSQRHFGRIDRLVRSTFLLDFILSGMSVIEPETHQTESKDEFPLRSKIDAPDQENGK
EEKDYTIETNTASKKRKSHKSRHENGIEEKDQILENDTASKKRKSNKSKHGSHKKVKDVA
YNKIEPIQLQA
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggagtcccttcggttgaaaactaactaccgctgtgttccggccctgcaacagttttac
accggcggccccttcgccgtctcatcagacggctccttcatcgtctgtgcatgcggcgat
tccattaaaatcgttgattccgccaacgcatccatcaggtccaccctcgaaggcgactcc
gaacaagtcaccgctttggctctttcccccaacgataaacttctcttctcttctagccac
agccgccaaatcagagtttgggacttatccactctcaaatgcgtgcgctcgtggaagggt
cacgatggtcctgttatgtgtatggcttgtgatgcttctggaggtttacttgctactggt
ggagctgataggaaggtccttgtttggaatgttgatgctggatattgctcacatttctat
aaaggtcatggtggagttgtttcttgtgttatgtttcatcctgatcctaagaaacagctt
cttttttctggtagtgatgatgggggtgataatgcaactgtaagggtttgggatatttcc
aatcccaagcgaaagacctgcattgcaatcctagataatcatcgctctgcagtgacttcc
attgcagtatctgaagacggatggacactgctcagtgctggaagagataagattgtaaca
ttgtgggatcttcatgattatagtagcaagaagactgtcatcacaaacgaggcagttgaa
tctgtttgtcctattggtgctgggagtccttttgctttatcattagattcatatcggcaa
aattcaaaaaaacatgctggttcccaagcaacacattttgttactgttggtgagcgaggc
attgtgcgcatatggagttctgaaggtgcagtttgcttgtttgagcaaaaagcttcagat
gttacaaacaacacagacgaggatggttcacgtaggggtttcacttctgctgttatgctt
ggctccaatcaaggattgctttgcgtgactgcagatcagcagtttctgttttactctctg
aactggattgaagagttgttgcaattaaatcttaccaaaagactagtgggatataatgaa
gaggttgtagatatgaagtttgttggggatgatgaaaagttccttgctcttgctacaaat
cttgaacaggttcgggtttatgaccttgcatctatgtcatgttcttatgtcttatctggt
catactgaaatagttctatgccttgacacctgtgtatcaagttctgggagaaacttaatt
gtgactggaagtaaagataacactgttaggttatgggactcagaaagtacaagctgcatt
ggagctggcataggtcacatgggagctgttggagccattgcattttcaaaaaaaaagcgg
gacttctttgttagtggcagtagtgatcatactcttaaggtgtggagtatggatggtctc
ttggacaatttgacagctccaattaacttaaaagcaaaagctgttgttgcagctcatgat
aaagatatcaattctgtagctgttgctccaaatgatagtttagtatgtagtggttctcag
gaccgcaccgcttgtgtttggagacttccagatctagtatcagtagttgtatttaaaggg
cataaaagaggaatctggtctgtagagttttcccctgttgatcaatgtgtagtaacagca
tccggggacaaaacaataaggatatgggctatatctgatggctcgtgtttgaagacattt
gaaggacacacttcaagtgtgttaagagcactgtttgttactcgcggaacacagattgtt
tcttgtggtgctgatggtttagtaaaactatggactgtaaaatcaaatgaatgtgttgcc
acttatgaccatcacgaagacaaggtttgggccttggctgtaggcagcaaaacagagctg
cttgcaactggtggtagtgatgctgttgtcaatctgtggctagattccactgcagctgat
aaagaagaagcttttcgtaaagaggaagagggagttttgaaaggtcaagagctagagaat
gccctatcagatgctgactataccaaggcagtccaaattgcatttgaattgcgcagaccc
cataaactcttggagttatttgcagaactttgcagaaagaaaggagctgaagatcacgtt
gacagagcacttaaggcctttggcaatgaagagcttcgtttattatttaactatattcga
gaatggaatacaaaaccaaagctctgttatgtctcacagttcgtgcttttcagagttttc
aacatctttcctccaacagaaattgttcagattaaaggggtcggggaactacttgaaggt
cttataccatatagtcagaggcactttggcagaatagatagacttgtaagaagcacattt
ttgttagacttcattctatcaggaatgtcagttattgaaccagagacccatcagacggaa
tcaaaggacgagtttccattacgatctaaaatcgatgctccagatcaagaaaatgggaaa
gaggagaaagattacactattgaaactaatactgcttcaaagaaaaggaagtcacacaaa
tctagacatgaaaacgggatcgaggaaaaggatcagattcttgaaaatgatacagcttca
aagaagaggaaatcaaacaaatcaaaacatggttcccacaagaaagtcaaggatgttgct
tacaacaaaattgaacctattcaattacaagcataa

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