Lathyrus oleraceus (garden pea): 127073922
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Entry
127073922 CDS
T08598
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127073922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127073922
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127073922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Utp13
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_HPS5
Ge1_WD40
Beta-prop_ACSF4
RAB3GAP2_N
WD40_like
Cytochrom_D1
DUF7973
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127073922
NCBI-ProteinID:
XP_050871128
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Position
4:119764815..119772948
Genome browser
AA seq
911 aa
AA seq
DB search
MESLRLKTNYRCVPALQQFYTGGPFAVSSDGSFIVCACGDSIKIVDSANASIRSTLEGDS
EQVTALALSPNDKLLFSSSHSRQIRVWDLSTLKCVRSWKGHDGPVMCMACDASGGLLATG
GADRKVLVWNVDAGYCSHFYKGHGGVVSCVMFHPDPKKQLLFSGSDDGGDNATVRVWDIS
NPKRKTCIAILDNHRSAVTSIAVSEDGWTLLSAGRDKIVTLWDLHDYSSKKTVITNEAVE
SVCPIGAGSPFALSLDSYRQNSKKHAGSQATHFVTVGERGIVRIWSSEGAVCLFEQKASD
VTNNTDEDGSRRGFTSAVMLGSNQGLLCVTADQQFLFYSLNWIEELLQLNLTKRLVGYNE
EVVDMKFVGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIVLCLDTCVSSSGRNLI
VTGSKDNTVRLWDSESTSCIGAGIGHMGAVGAIAFSKKKRDFFVSGSSDHTLKVWSMDGL
LDNLTAPINLKAKAVVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKSNECVATYDHHEDKVWALAVGSKTELLATGGSDAVVNLWLDSTAAD
KEEAFRKEEEGVLKGQELENALSDADYTKAVQIAFELRRPHKLLELFAELCRKKGAEDHV
DRALKAFGNEELRLLFNYIREWNTKPKLCYVSQFVLFRVFNIFPPTEIVQIKGVGELLEG
LIPYSQRHFGRIDRLVRSTFLLDFILSGMSVIEPETHQTESKDEFPLRSKIDAPDQENGK
EEKDYTIETNTASKKRKSHKSRHENGIEEKDQILENDTASKKRKSNKSKHGSHKKVKDVA
YNKIEPIQLQA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccttcggttgaaaactaactaccgctgtgttccggccctgcaacagttttac
accggcggccccttcgccgtctcatcagacggctccttcatcgtctgtgcatgcggcgat
tccattaaaatcgttgattccgccaacgcatccatcaggtccaccctcgaaggcgactcc
gaacaagtcaccgctttggctctttcccccaacgataaacttctcttctcttctagccac
agccgccaaatcagagtttgggacttatccactctcaaatgcgtgcgctcgtggaagggt
cacgatggtcctgttatgtgtatggcttgtgatgcttctggaggtttacttgctactggt
ggagctgataggaaggtccttgtttggaatgttgatgctggatattgctcacatttctat
aaaggtcatggtggagttgtttcttgtgttatgtttcatcctgatcctaagaaacagctt
cttttttctggtagtgatgatgggggtgataatgcaactgtaagggtttgggatatttcc
aatcccaagcgaaagacctgcattgcaatcctagataatcatcgctctgcagtgacttcc
attgcagtatctgaagacggatggacactgctcagtgctggaagagataagattgtaaca
ttgtgggatcttcatgattatagtagcaagaagactgtcatcacaaacgaggcagttgaa
tctgtttgtcctattggtgctgggagtccttttgctttatcattagattcatatcggcaa
aattcaaaaaaacatgctggttcccaagcaacacattttgttactgttggtgagcgaggc
attgtgcgcatatggagttctgaaggtgcagtttgcttgtttgagcaaaaagcttcagat
gttacaaacaacacagacgaggatggttcacgtaggggtttcacttctgctgttatgctt
ggctccaatcaaggattgctttgcgtgactgcagatcagcagtttctgttttactctctg
aactggattgaagagttgttgcaattaaatcttaccaaaagactagtgggatataatgaa
gaggttgtagatatgaagtttgttggggatgatgaaaagttccttgctcttgctacaaat
cttgaacaggttcgggtttatgaccttgcatctatgtcatgttcttatgtcttatctggt
catactgaaatagttctatgccttgacacctgtgtatcaagttctgggagaaacttaatt
gtgactggaagtaaagataacactgttaggttatgggactcagaaagtacaagctgcatt
ggagctggcataggtcacatgggagctgttggagccattgcattttcaaaaaaaaagcgg
gacttctttgttagtggcagtagtgatcatactcttaaggtgtggagtatggatggtctc
ttggacaatttgacagctccaattaacttaaaagcaaaagctgttgttgcagctcatgat
aaagatatcaattctgtagctgttgctccaaatgatagtttagtatgtagtggttctcag
gaccgcaccgcttgtgtttggagacttccagatctagtatcagtagttgtatttaaaggg
cataaaagaggaatctggtctgtagagttttcccctgttgatcaatgtgtagtaacagca
tccggggacaaaacaataaggatatgggctatatctgatggctcgtgtttgaagacattt
gaaggacacacttcaagtgtgttaagagcactgtttgttactcgcggaacacagattgtt
tcttgtggtgctgatggtttagtaaaactatggactgtaaaatcaaatgaatgtgttgcc
acttatgaccatcacgaagacaaggtttgggccttggctgtaggcagcaaaacagagctg
cttgcaactggtggtagtgatgctgttgtcaatctgtggctagattccactgcagctgat
aaagaagaagcttttcgtaaagaggaagagggagttttgaaaggtcaagagctagagaat
gccctatcagatgctgactataccaaggcagtccaaattgcatttgaattgcgcagaccc
cataaactcttggagttatttgcagaactttgcagaaagaaaggagctgaagatcacgtt
gacagagcacttaaggcctttggcaatgaagagcttcgtttattatttaactatattcga
gaatggaatacaaaaccaaagctctgttatgtctcacagttcgtgcttttcagagttttc
aacatctttcctccaacagaaattgttcagattaaaggggtcggggaactacttgaaggt
cttataccatatagtcagaggcactttggcagaatagatagacttgtaagaagcacattt
ttgttagacttcattctatcaggaatgtcagttattgaaccagagacccatcagacggaa
tcaaaggacgagtttccattacgatctaaaatcgatgctccagatcaagaaaatgggaaa
gaggagaaagattacactattgaaactaatactgcttcaaagaaaaggaagtcacacaaa
tctagacatgaaaacgggatcgaggaaaaggatcagattcttgaaaatgatacagcttca
aagaagaggaaatcaaacaaatcaaaacatggttcccacaagaaagtcaaggatgttgct
tacaacaaaattgaacctattcaattacaagcataa
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