Lathyrus oleraceus (garden pea): 127073967
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Entry
127073967 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127073967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127073967
03009 Ribosome biogenesis [BR:
psat03009
]
127073967
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127073967
Spliceosome [BR:
psat03041
]
Complex A
U1 snRNP components
U1 related factors
127073967
Complex B
127073967
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127073967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127073967
NCBI-ProteinID:
XP_050871173
LinkDB
All DBs
Position
4:complement(124497782..124502509)
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AA seq
632 aa
AA seq
DB search
MNPYDNRYSDSTSFRGRRSDLVGPMPPPNFGRGGPAPYGASYASHAPTGFGSAPVTPIPH
FLPPPGGFSVGRGGGFGPRLGNGHASDRKYDSGRYGSSGGGGGGRGRGGFGGGGGGRGGS
HGFRGSGGGRGGSGGRGGGFGGRHGSSKDDLNNITLPKQDFRNLVPFQKNFYVESPVITA
MSDQQVMHYRASRDITVEGHDVPKPIRSFHEANFPDHCLEVIAKLGFVEPTPIQAQGWPM
ALTGRDLVGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEA
MKFGSRSNIRCTCIYGGAPKGPQIRDLRIGVEIVIATPGRLIDMLEARHTNLQRVTYLVL
DEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVEALARQFLHNPYKVVIGSPYL
KANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTKQLRMDGWPAL
SIHGDKNQSERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRI
GRTGRAGAKGTAYSFFTRGNAKYARELIKILQDAGQVISPALSELTRSAGFGQHASRGGF
RSRGRGGGYGNRGSTSGSNAIPVGGKRPWQYV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctacgacaatcgttactcggattccacttcttttcgcggccgccgcagtgat
ctcgttggacctatgccgccgcctaatttcggccgcggcggtcctgctccttacggtgct
tcttatgcatcccatgctcccaccggtttcggatccgcgcccgttaccccgattcctcac
tttttacctcctcccggtggatttagtgttggtcgtggcggtggttttggtcctagattg
ggaaacggtcatgcctctgatagaaaatatgactctggtcgttatggtagtagtggtggt
ggtggcggtggaagaggtcgtggtggttttggcggcggtggtggtggtagaggtggaagt
cacggttttagaggctctggtggtggtagaggaggaagtggagggagaggtggtgggttt
ggaggtagacatgggtcttctaaagatgacttgaataatattactcttccgaagcaagat
tttaggaatttggtcccttttcagaagaatttttatgttgaaagccctgtgataacagct
atgtctgatcagcaagttatgcattatcgtgctagtagggatattactgttgaagggcat
gatgtgccaaaaccaattcggtcttttcacgaggctaattttcctgatcattgccttgag
gttattgccaagttgggttttgttgaacctactccaattcaggctcagggttggcccatg
gctcttacgggtagagatttagttggcattgctgagactggctcgggtaaaactctgtcg
tatttacttccggctatagttcatgtcagtgcacaacctcgactggtacaaggggagggt
cctgttgtcctggttttagcaccaactagagagttagctgttcaaattcaacaggaagct
atgaaatttggatcacggtcaaatattagatgtacatgcatatacggtggtgctccaaag
ggccctcaaattcgtgatcttagaataggtgttgagattgttattgctacacctggtcgt
ctaatagatatgttagaagctcggcacacaaacctccagagagtgacataccttgtcttg
gatgaagctgataggatgttggatatgggttttgaacctcagattcggaagattgtaaac
cagattcgaccagataggcagacattatactggagtgcaacatggccaaaggaggttgaa
gctctggcaagacagtttctgcacaacccatataaggtagttattgggtcaccatattta
aaagcaaaccaatctataaatcaagttgttgaagttgtcactgacatggagaaatataac
agactgatcaagctgctgaaagaagtgatggacgggagccgaattctaatatttacggaa
acaaaaaagggatgtgaccaagttacaaaacagttgagaatggatggatggccagcatta
tctatccatggtgataaaaaccagtctgaaagggactgggttttggctgaatttaagagt
ggcagaagtccaataatgactgccaccgatgttgctgcacggggtcttgatgtgaaggac
ataaagtgcgtggtcaattatgattttccatcaagcctcgaagactatgtccacagaatt
ggtcgaactggtcgtgcaggagctaaaggaactgcatacagtttttttacccgtggcaat
gccaagtatgctagggagttgataaagatcttacaagatgctggtcaggttattagtcct
gcattgtctgaattgacccggtctgctggttttggtcaacatgcatcaagaggaggtttt
cgctctagaggacgtggaggaggctatggcaaccggggttcaacatcaggatccaatgcc
attcctgttggcgggaagaggccgtggcagtatgtgtaa
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