Pisum sativum (pea): 127074045
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Entry
127074045 CDS
T08598
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127074045
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
127074045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_RFWD3
WDR55
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
VPS8_N
PEP5_VPS11_N
WD40_like
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
127074045
NCBI-ProteinID:
XP_050871263
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Position
4:132973464..132976804
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AA seq
503 aa
AA seq
DB search
MNMVQVVEEREALVACSDQSMRIGVTIWDMETGEKMFHIPTCCSPPLGLLCLRNQFLVAS
QLNKHGSIGGGSIVVWPLNKPHQPIMNNTVEAIGPLSCTKDGIYLVGGGLSGNAYIWNVI
NGKLLKTWTAHYKSLKHIIFSNDDSLLVSGSADGMLCVWSMIRLLDVEESESWNPLLHHL
PGHMSSITGLLATPCNGYSFIISSALDGTCKVWDFMTGKLVQTQGYPLAITCITLHQVES
LLFCGAENGTIFVNKLDIGLEEGLNSIIRGNQSHELKGHSGAIIAMTSSRTGLISSSEDC
TICIWNVINRTITRRFNLEKAAKVTNLVVILRSSILSTLNHTRGSNQYNVSPLGKSPLQI
NGHNETTSLHSLCRLFQEKQTYIDLRSTGLLRQNISDSQKTHVSMAMTLQMKVDRNIENR
SWATKMAKHVMVINRQMKSRLLDLIHRRLFCTNKINLQKTGMMNMIGMMSRKQRQGIKKS
FKMEQGNESESALEAKTLVKFTG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggtacaagtggtggaagaacgagaggcattggtagcatgcagtgaccaaagc
atgagaattggagtgacgatatgggacatggaaacaggagaaaagatgttccacatacca
acatgttgttcaccacctttaggtttgttgtgtttaagaaaccagttccttgttgcgtca
cagttgaacaaacatggatctattggtggtggatccattgttgtatggcccttgaataag
cctcatcaaccgattatgaataacacagtggaagccattgggccactttcttgcacaaaa
gatggcatataccttgtgggaggtggtttatcaggaaatgcttatatctggaatgtgatt
aatggaaaattgttgaagacttggacagctcattataaatctctaaagcacataatattt
tcaaatgatgattctcttcttgtttctggttcagctgatggcatgttgtgtgtctggtcc
atgataaggttgttagatgtggaagaatcagaaagctggaatcctttattacatcatttg
ccagggcatatgtcctcaataacaggccttttagctacgccttgcaatggttattcattt
ataatatcaagtgctcttgatggaacatgcaaggtttgggactttatgactggaaagctt
gtgcaaactcaaggctatcctttggcaataacttgcattacccttcatcaagttgaaagt
cttttgttctgtggtgcagaaaatggaacaatatttgtcaacaaacttgatattggtttg
gaagaaggtcttaattcaattattagaggaaatcaatcacatgagctgaaaggacacagt
ggagccattattgcaatgacatctagtaggacaggcctaatatcttcttcagaagactgc
acaatatgcatatggaatgtcatcaacaggacaatcactagaagatttaatcttgaaaaa
gcagcgaaagtaactaatcttgtggtaatacttcgatcttcgattctctccacattaaat
catacaagaggctccaatcaatacaacgtttctccattgggaaagtctcctctacaaatc
aatggacacaatgaaactacctctcttcattctttgtgccgtctcttccaagaaaaacaa
acttatattgatttaagaagcactggtctattgagacaaaacatttctgattcacagaaa
acacatgtgtctatggccatgaccttgcaaatgaaagtggatagaaatatagagaatcgt
tcatgggcaacaaagatggcaaaacatgttatggtgataaacagacagatgaagtcacgg
ctgttggacttgatacatcgtagattgttttgtactaacaaaataaaccttcaaaaaaca
ggaatgatgaacatgataggaatgatgagtaggaagcaaagacaaggaatcaaaaaatca
ttcaaaatggagcaagggaacgaatctgaaagtgcattagaggcaaagactctagttaaa
tttactgggtga
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