KEGG   Pisum sativum (pea): 127074076
Entry
127074076         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
psat  Pisum sativum (pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127074076
   03410 Base excision repair
    127074076
   03420 Nucleotide excision repair
    127074076
   03430 Mismatch repair
    127074076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127074076
   03036 Chromosome and associated proteins [BR:psat03036]
    127074076
   03400 DNA repair and recombination proteins [BR:psat03400]
    127074076
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127074076
  DNA Replication Termination Factors
   ELG1-RFC complex
    127074076
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127074076
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127074076
  Check point factors
   HRAD17(Rad24)-RFC complex
    127074076
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 nSTAND3 RuvB_N AAA_11 AAA_5 AAA_24 AAA_28 AAA_19 RCF1-5-like_lid MeaB AAA_30 AAA_25 RNA_helicase AAA_18 AAA_3 AAA_assoc_2 ABC_tran DNAX_ATPase_lid bpMoxR IstB_IS21 KTI12 NTPase_1 AAA_7 SLFN-g3_helicase T2SSE NPHP3_N DO-GTPase1 AAA_29
Other DBs
NCBI-GeneID: 127074076
NCBI-ProteinID: XP_050871309
LinkDB
Position
4:135488087..135499069
AA seq 332 aa
MASSSSSNSANYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRL
MVVVQAEKVPYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLH
VKNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQMCGLLAKFSLARETAKAP
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcatcgtcatcctcaagcaacagcgcaaactacgacgtgccgtgggttgagaagtac
cgacccagcaaggtcgtcgacatcgtcggcaatgaagacgccgtctcccggctccaagtc
atcgctcgtgacggcaacatgcccaacctcattttatcaggtcctcctggaactggaaaa
accactagtatactcgcccttgcgcacgagcttctcggtcccaattacagagaagctgtt
cttgaactaaatgcttcagatgatagaggaatagatgttgtgaggaacaagatcaagatg
tttgctcaaaagaaagtaacacttcctccaggccgacacaaagttgttatactcgatgaa
gctgacagtatgacatctggagcacaacaagctttgagaaggacgatggagatatattct
aattctactcgtttcgcgcttgcttgcaatacatcgtctaagattattgagccgattcag
agtaggtgtgcaattgtgagattttcgcgactatctgatcaagagatacttggtcgtctc
atggttgtggttcaagctgagaaggttccctatgtccctgaaggactcgaggccatcatt
ttcaccgctgatggtgatatgaggcagggattgaacaacttgcaagcaacattcagcggg
ttccagtttgttaaccaagcaaatgtttttaaggtttgtgaccagccacatccactgcat
gtgaagaatatggtgcgcaatgtaattgaagggaattttgatgaggcttgttcagggctc
aagcaattgtatgacttgggatattcccccacagatatcatcaccactctttttcgtatc
ataaaaagttatgatatggctgagtacttgaaattagaattcatgaaggaaactggattt
gctcatatgaggatttgtgatggagttggttcttatcttcagatgtgtggtctactggcc
aagttttctttagctcgcgaaactgctaaagctccatga

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