Lathyrus oleraceus (garden pea): 127074807
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Entry
127074807 CDS
T08598
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127074807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psat03036
]
127074807
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
127074807
SWR1 complex
127074807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DUF6283
Motif
Other DBs
NCBI-GeneID:
127074807
NCBI-ProteinID:
XP_050872138
LinkDB
All DBs
Position
4:240661145..240679078
Genome browser
AA seq
2048 aa
AA seq
DB search
MASKGQRSKVDHDYKVKRPKALEAPKDPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVSLKASKGMLDHATRGEKKMKEEEQRLRKVAMSISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDAHTPAEKISAEHHTGIQCKDIDGDIINEP
QEANVEYQSNTPDHDEEYDVQSDDVLDDDEQTLEEDEALITKEERQEELAALQNEMDLPI
EELLKRYAGDKGELTRHESSPDRSEDDEKIVGTDGADGQDEPVLENGDRLSISKIGTSNS
GMVPGLRCDDNNGDAATPTNSLSQNENQQFGSRKEVTSEAANENVPFDFSDEEEDGDFLF
GTEDKDDETTLSEEEKLDRVDAIDPKDEIALLQKESNMSVEELLARYKKDLSDDGDQEVE
SDYDSASSKDHQSSPVHVDDDAEQKIPAVDVGEDMKSGKQLAVVQTQAEEQGEGPCENSE
ERESEDIIADAAAAARSAQPTGNTFSTTKVRTKSPFLLKYTLREYQHIGLDWLVTMYEKK
LNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKIL
TYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKS
QRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVE
GEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKIEHVIYCRLSKRQRNLYEDFIASS
ETQATLANANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIDIQLSSSICSMLLPS
SFSTVDLEGLGLLFTHLDYNMTSWESDEVQSIETPATSIMERTDMADLEVIKPGLKCQKK
QQGTSIFEEIRKAIWEERISQAKERAAAIAWWNSLRCKKRPIYSTTLRDLVTIRHPVYDI
YQKKANPVSYLFPSKLADIVLSPVERFQRTIDVVESFMFAIPAARASPPVCWCSKRDTTV
FLNPSYKQRCSDILSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGH
RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRS
GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA
KQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLSIKDTPKEKNQNRGEVSVTNADVE
AALKHVEDEADYMALKKVELEEAVDNQEFTEEASGRLEEDEYANEDDEPQELGESVSNLN
KEDALMLNGGDPKEDKPPSVVAKEDDVDMLADVNQMAEAAAAAGQALSAFESELRPIDRY
AIRFLELWDPIIDKAALESEVRIEDTEWELDRIERYKEEMEAEIDEDEEPLVYESWDADF
ATTAYRQQVEALAQHQLMEELEYEAKLKEEAEEEKNRTQTPNDSKLKPKKKPKKAKFKSL
KKGSLTSSLRTVKDERRAVPMAIDDDAATSLDFVSPSSSRHKKRKKSKLTTDGEEEKRFK
KSKKYKRDPLDIYDSDLESISIDMQDEHAESDTCKSLVVLEQKTVGRSKMGGKISITPMP
VKRVFMIKSEKLKKGNIWYRDCIPSADFWLPQEDAILCAVVHEYGPNWSFVSEMLYGMTA
GGAYRGRYRHPVHCCERFRELFQKYVLFSLDNANHEKMNNTCSGKALKVTEDNIQILLDV
ASEQANRELLLQKHFFALLSSARKVASHVDRRQNPHATSNGLYFDQAFFTSIGQHSQYPL
NKPSERTAFANSAQSKKLLEAALEDMSRPANDKTFLSNQGGGMPVSAEQVDITLEFPKEE
SDSLSSFPSVIKLSIKGDEALPSLNKHTRDDHLKSCFSAAENRFREVSRACEEDRSGWAS
STFPTNDAKSRPGSRIQSSGKQRSSISDLTKPSRGKTKRASVDSSEMHRCQAEPLFPPMP
LLPELALDLPSSSMNEFGFTTDRNLPFDLNEESSLERESFGVIPHDYIAELISGLDDCTT
FPEYTDVR
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaaggtcaaaggtctaaggttgatcatgattataaagttaaacggccgaag
gctcttgaagctccaaaggatcctagacgacccaaaactcattgggaccatgttttagaa
gagatggtgtggctatcaaaggacttcgagtcagagaggaaatggaaattagctcaggca
aagaaagtttctttaaaagccagcaaaggcatgttagatcatgctacaagaggtgaaaag
aaaatgaaggaagaagagcagcggttaagaaaagttgcaatgagtatttctaaggatgtt
aagaaattttggacaaaaatagaaaagctggttctttacaagcatcaaatggaactcgat
gagaagaaaaaaaaggcacttgacaaacagcttgagtttcttttagggcaaactgagaga
tactcaactatgttggccgagaatcttgtggatgctcatacaccagcagagaaaatttct
gcagagcatcacacaggtattcaatgcaaagatatagatggagacatcatcaatgaacct
caggaagctaatgttgagtatcaatccaacacacctgatcatgatgaagaatatgatgta
caatctgatgatgtattggatgatgatgagcaaacccttgaagaagatgaggctcttata
actaaagaagaaaggcaagaggaattggcagctttgcagaatgaaatggatcttccaatt
gaggagttactcaaacgttatgctggagataaaggagaattgacaaggcatgaaagtagt
ccggatcgtagtgaagatgatgaaaaaatagttggaactgatggtgctgatggtcaggac
gaaccagtattggaaaatggagatcgtctatctataagcaaaataggtacaagcaactct
ggcatggtccctggtctacgttgtgatgacaataatggtgatgcagctacaccaacaaat
agtctatctcaaaatgagaatcagcaatttggaagtcgtaaggaggttaccagtgaggca
gccaatgaaaatgttccatttgatttttctgatgaagaggaagatggtgactttttgttt
ggcacagaggataaggatgatgagacaaccttatctgaggaagaaaaactggacagagtt
gatgcaattgatccaaaagacgagattgcattactacaaaaagagagtaacatgtcggtt
gaggaactacttgcaaggtataaaaaggacctgagtgatgatggggatcaggaagttgag
tctgattatgattctgcttcctcaaaagaccatcagagttcaccagtccatgttgatgat
gatgctgagcagaaaattcctgctgttgatgtgggtgaagatatgaagtctggcaagcaa
ctggctgtcgtacagacccaggcagaagaacagggggaaggaccctgtgaaaattcagag
gaaagagaaagtgaggatataattgctgatgcagctgctgctgcaagatcagcacaacca
actggaaacaccttctccacaactaaagtgcgtacaaaatccccctttctactcaagtac
actcttcgtgaatatcaacatattggattggattggctcgtaacaatgtatgaaaaaaag
ctgaatggaattctggcagatgaaatggggcttggaaaaaccataatgactatagctttg
cttgcacatcttgcctgtgaaaaggggatttggggtccacatctaattgtagtgccaact
agtgtgatgcttaactgggagactgaatttctgaaatggtgtcccgcgtttaaaattttg
acctattttggaagcgcaaaggagcgaaaacataaaagacaaggatggttaaaaccaaac
tcatttcacgtatgcataacaacatatagattagttattcaggattccaaagtttttaag
cgcaaaaagtggaaatacttgatcttagatgaagctcacctcattaaaaactggaaatca
caaaggtggcagacactgttgaatttcaattcaaaacgacgaattctgttgactggtaca
ccgctacagaatgatctcatggaactgtggtctctcatgcatttcttgatgccccatgtt
ttccagtcacaccaagagtttaaggattggtttagtaatcctatatcagggatggtagag
ggagaggaaaaagttaataaggaggttgttgatcgcctgcataacgtccttcgtccattc
ttactccgtcgattaaagagagatgtagaaaagcaacttcccatgaaaattgagcatgtc
atatactgtaggctgtcaaagaggcagaggaatttgtatgaggattttattgctagctca
gagactcaagctactcttgcaaatgccaatttttttgggatgatcagtattatcatgcaa
cttcggaaggtttgtaatcatcctgacctatttgagggtcgtccaatcgtcagttctttt
gatatgtgtgggattgatattcagttaagttcttctatttgctccatgcttttgcctagc
tccttttcaacagttgacttagaaggtttgggtcttttatttactcatcttgactataac
atgacttcttgggagagtgatgaagtgcaatctattgagacccctgcaacttctattatg
gaacgcactgatatggctgatctagaagtaattaagcctggactgaagtgtcagaaaaag
cagcaaggaacaagtattttcgaagagatccgaaaagcaatttgggaagagagaatatca
caggcaaaggaacgtgcagcagctattgcatggtggaactccttgaggtgtaaaaaacga
cccatctactcaaccactctaagggaccttgttaccataaggcatcctgtatatgatatt
tatcaaaagaaggcaaaccctgtttcatacttgttcccatcaaaactggctgacattgtt
ctctcccctgttgaacgatttcaaaggacgattgatgtggttgaaagtttcatgtttgcc
attcctgccgcccgagcttcccctcctgtttgctggtgcagtaaaagggatacaactgtc
tttctgaacccatcttacaagcagcgatgctctgatattctatcaccactattgtcacca
atcaggcccgcaattgttcgtcgtcaagtatatttcccagataggcgacttatacaattc
gactgtggaaaattacaggagctagcaattttgctgaggagattaaaatcagaaggtcac
cgagctctgatattcactcagatgactaagatgcttgacatattagaagcgttcattaat
ttgtatggttatacttatatgcgcttagatggatcaacgcagccagaggagaggcagacc
ttaatgcagcgttttaacacaaaccccaaattttttcttttcatcctgtcaactcgtagt
gggggtgttggtatcaatctagttggagctgacacagttattttttatgatagtgactgg
aatcctgctatggatcaacaggctcaagatcgatgccacagaattggtcagacacgtgaa
gtgcatatatatcgattgattagtgaaagcaccattgaggagaatattttgaagaaagca
aagcaaaagcgcgcacttgatgatttagttatacaaagtgggggttataatactgagttc
ttcaaaaagcttgatccgatggaactattttcaggtcatagaacactttcaattaaagac
acgccgaaggagaaaaaccagaacaggggagaagtttctgttactaatgcagatgtggaa
gctgcattaaaacatgtcgaagatgaggcagattatatggcactgaagaaagttgaactg
gaagaagccgtggataatcaggaatttacagaagaagccagtgggagacttgaagaggat
gaatatgcaaatgaggatgatgagcctcaagaattaggcgaatctgtttccaatttgaat
aaagaggatgcattaatgttaaatggaggtgatcctaaggaagataaaccgccctctgtt
gttgccaaagaagatgatgttgacatgctggcagatgtgaaccagatggcagaagctgca
gctgcagctgggcaggcgttatcagcatttgagagtgagctacgccctattgaccgatat
gccattcgttttctagagctgtgggatccaattatagataaagcagccttggaatctgaa
gtcaggattgaggatactgaatgggaattggatcgcattgaaaggtataaggaggagatg
gaagccgaaattgacgaagatgaggagcctcttgtatatgaaagctgggatgcagatttt
gcaacaacggcttatcggcagcaagtagaggccttggctcaacatcaattaatggaagaa
cttgaatatgaagctaaactgaaagaggaagctgaagaagagaaaaacaggactcaaaca
ccaaatgattcgaagctcaagcctaaaaagaaacccaagaaagcaaagttcaaatctctg
aagaaaggatctttaacctctagcttaagaactgtgaaagatgagcgacgagcagtgcca
atggccatagatgatgatgctgccactagtcttgattttgtgtctccaagttcaagtaga
cataaaaaacgcaagaagtctaaattaacaactgatggtgaagaagaaaagagatttaag
aagtccaaaaagtacaagagggatcctcttgacatttatgattcagatttggaatccata
tcaatagatatgcaggatgaacatgcagaatcagatacatgtaaaagtctggttgtgttg
gaacagaaaacagttggcaggagtaagatgggaggaaaaatatccatcactccaatgcct
gtgaaacgggtcttcatgataaaatccgaaaaattgaagaagggaaatatttggtacaga
gattgtattccttcagctgatttttggctgcctcaggaggatgcaatattatgtgcagtt
gttcatgaatatggtcctaactggagctttgttagtgaaatgctttatggcatgactgct
ggtggggcatatagggggagatatcgtcatcctgtccattgctgtgagaggttcagagaa
ttgttccaaaaatatgtcttgttctccttggacaatgcaaatcatgagaaaatgaacaac
acctgctctggaaaggctcttaaagtaacagaggataacattcaaatattgttagatgtt
gcttctgaacaggcaaatagagagttattactgcagaagcacttttttgcattgctttct
tctgccaggaaggtggcgtcacatgttgaccgcagacaaaatcctcatgccactagcaat
ggtctctattttgaccaggctttcttcacttcaattggccagcattcacaataccccctg
aacaaaccctccgaaaggacggcgtttgctaattcggcccagagcaagaagttactggaa
gctgcactggaagacatgagtaggccagcaaatgacaaaacattcctatctaaccagggt
ggaggcatgccggtgagtgcagaacaggtggatattactctggagttcccgaaagaggaa
agtgattccttatcctcatttccatctgttataaaattatcaataaaaggggatgaagca
ctgccatctttaaataagcacacaagagatgatcatctcaaaagttgtttttctgctgct
gagaatcgtttcagggaggtatcaagagcttgtgaagaagaccgatctggatgggcttca
tccacattcccaacaaatgatgcgaagtctcgacctggatccaggatacagtcttctgga
aagcaaaggtcttccatctccgatcttactaagccgtctaggggaaagacaaaaagagct
tcagtggattctagtgaaatgcatcgctgtcaagctgaaccattattcccgccaatgccg
ctgcttcctgaactggcattggatctcccttcatcttctatgaatgagtttgggtttact
acggatagaaatctcccttttgatttgaatgaagaaagttcattggaaagggaaagtttt
ggagtcatcccacatgattatatagctgagttaatctcgggccttgatgattgtacaaca
ttccctgaatatactgatgttagataa
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integrated database retrieval system
