Lathyrus oleraceus (garden pea): 127075297
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Entry
127075297 CDS
T08598
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127075297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075297
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127075297
mRNA degradation factors
5'-3' decay
Decapping complex
127075297
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
127075297
NCBI-ProteinID:
XP_050872740
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Position
4:complement(319786039..319794141)
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AA seq
881 aa
AA seq
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MDVFTAAGVDALGASNNQDLNLLENVPQDGALFDASQYAFFGKDVAEEVELGGLGDENDY
IPSVEFNEEEFFLNAEEAEDVRSFSEIDDLTTTFLKLNKTVSGPRNAGVIGDRVSRENSS
ASEWSQRDDVPYWVDYHTCDSEGSQDGKRWSSHPHSSVTHLQESKPLCRTSSYPEQQRQL
QYHLEHRSSEPVPNWFDQHFYDSETTGDEKRWSSHPHSSISHTEEPRPLYRTSSYPDKRQ
ELPRFSSEPVLAPKSSFTSYPPPGGRSQQSSSNHSTGQLNIPYARGAHMALSSQNPSHLF
NSALHLGGSKYEPHFSGNLAQFNTGSPLNNRIQNQWVNQTGLYTGDNSNLLNNMLQQQLY
HHNGSVSPHLLTQLQQQPHRLPHPVQQSAALMSGLQPHLFNHHLSPGSSIGRKYEHVHGF
GDVREHRQKSTRRHRISQQGSNASSQKSDSCSIQFRSKYMTSEEIESILKMQLAVTHSND
PYIDDYYHQACLAKTPSGAKFKFSFCPAKIKDISSRSRANSEPYRFLQVDTLGRVSYLPI
RQPRPLLEDDPPNSSASGGSERNISEKPLEGEPLFAARVTIEDGLCLLLDVDDIDRFLKC
NLLQDGGTQFLRRRSVLLEGLATSLHLVDPLGKNGHKAGLAAKDDLVFLRLASLTKGRKL
LAKYLRLLVPGSELMRIACMAIFRHLRFLFGSISSDSALAETTSDLAMVVCQCVQGMDLG
SLGACLAAVVCSSEQPPLRPIGSSAGDGASLVLVSVLEGATKLLTDHHAASNNKLGNRPF
WQASFDEFFDLLTKYCMNKYQSIMQSLLTQGAQNRPVIGSDAAKSVSKEMPVELLRASLP
HTNDRQRKLLLDFAQRSLPVVGFNNYAGSSTSRVNSERVIS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttcactgctgctggggttgacgctcttggtgcttccaacaaccaagatctt
aacctcttggaaaatgttcctcaagatggtgcattatttgatgcatcacagtatgcattc
ttcggtaaagatgtcgctgaggaagttgagttgggggggttaggcgatgaaaatgattac
atcccttctgttgagttcaacgaggaggagttttttctcaatgcggaagaggcggaggat
gtaagatctttttctgaaattgatgatctcacaaccacttttttgaagttgaacaaaact
gttagtggaccaagaaatgcaggagttattggtgatcgggtgtcaagagaaaattcttct
gcttctgaatggtcacagagggatgatgttccctactgggttgactatcacacttgtgat
agtgaaggttctcaggatggcaaaagatggtcctcacatccacattcttctgtcacccat
ctacaagaatcaaagcccttatgccgaacgtcgtcgtatcctgagcagcaaaggcagctg
caataccacctcgaacatcgctctagtgaacctgttcctaactggtttgatcagcatttt
tatgatagtgaaactactggtgatgaaaagagatggtcatcacatccacattcctctatt
tcacacacagaagaaccaaggcccttgtatagaacgtcttcttatcctgacaagagacaa
gaacttcctcgtttttcgagcgaaccagttttggcgccaaaatcttcattcacttcttat
cctccccctggtggtaggtctcaacaatcttcttcaaatcacagtacaggccagttgaat
attccttatgctaggggagctcacatggcactgtcatcacaaaatccctctcatttattc
aattctgcattacacttgggtggatcaaaatatgagccacattttagtggaaatttggcc
caatttaatactggctcccccctcaataatcggatccagaatcaatgggtcaaccaaaca
gggttgtatactggagataattcaaaccttctgaataatatgctacagcaacaactatac
catcacaatggatcagtgtctcctcacttactgactcagctgcagcaacagccgcataga
ttgcctcatcctgttcagcagtccgcagccttaatgtcaggtttacagccccatttattt
aatcaccatctttcgcctggatcatccattggtagaaaatatgaacatgtgcatggtttt
ggtgatgttagagaacatagacaaaaatcaactcgtagacatcggatctctcaacagggt
tctaatgccagtagccagaagagcgatagttgttcaatacaattcaggtccaagtatatg
actagtgaagaaattgagagtattcttaaaatgcaacttgccgtgactcatagtaatgac
ccatatatcgatgactattatcaccaagcttgtcttgcaaaaacaccttctggggctaaa
tttaaattttcattttgcccagccaaaataaaggatatttcctcacgatctcgtgccaat
tctgagccatacaggtttcttcaggttgacactttagggagggtttcttacttgcctatt
cgtcagcctcgccctcttcttgaagacgatcctccaaactcctctgctagtggtggctct
gagcgaaatatttcagagaagccccttgagggggagcctttgtttgcagccagagtcaca
attgaggatggtctctgtcttcttcttgatgtagatgatattgatcgtttcctaaagtgc
aatctgcttcaagatggtggaactcaattcttacgaagaaggagtgtccttctggaagga
ttagcaacatcactccatcttgtggacccactgggaaagaatggacacaaagctgggctt
gctgctaaggatgatcttgttttcttgcgattagcatctcttaccaagggaaggaagctc
ctagcaaagtatcttcggttgcttgttcccggtagtgagcttatgaggattgcctgcatg
gctatatttcgtcatttaagattcttatttggtagtatctcttctgattcagcattagcg
gagactacaagtgatcttgctatggttgtttgtcagtgtgtccaaggaatggatcttggt
tctcttggtgcttgtcttgcagcagttgtttgttcctcagagcagcctcctcttcgtccc
attggaagctctgccggagatggtgcttcccttgttttagtgtctgtcctcgagggggct
actaaacttctaactgatcatcacgccgcttctaacaataaattgggcaatcgcccattt
tggcaggcctcatttgatgaattttttgacctcctcacgaagtattgcatgaataagtac
cagagtatcatgcagtcactgcttacacaaggggcacagaacagacctgtgattggatca
gatgctgctaaatcagttagtaaggaaatgccggttgagcttctacgtgcaagtcttcct
cacaccaatgatcgccagagaaagttattactagatttcgctcagcgctctttgccggtg
gttggatttaacaactatgctgggagcagtactagccgcgtgaactcagagagggtgatt
agttga
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